Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00318 ATGCAAGACCCATTCCAAGGTGTGAAGCCACCACCCCAGTTTCCTGAACAAGAACAACTCAAATGCCCGCGCTGTGACTCCACCAACACCAAATTCTGCTACTACAACAACTACAACCTCTCCCAGCCACGCCACTTTTGCAAGAACTGCAGAAGGTACTGGACTAAAGGTGGTGCTTTGAGGAACATCCCTGTTGGGGGTGGAAGCAGAAAGAGCACAAAACGTTCATCATCATCAACCTCCTCAAAGCGTTCTTCTGCACCATCTTCTTCTTCTTCTTCTTCTGCAGTTTCGGACTCTGACCCGACCCGGATTTGCACCAACCCGGTTGATCAGGACCCAAGGGTGCTCAACATTGGTGGTGGCAGCTTCAGTTCCCTCTTGGCTTCATCTGGGCACTTTGGAACCCTCTTTGAGGGTCTCAATCCAACTGGGTCGGGTCTCAAAATGGGTGATTTTGGGGAGGGTGTGGGTTCTGACCCGGGTTTGAATTTGGATTCGGGTTCAAACCCGGATTTGCATGTTCAGGGCAATGGGAATTCAGAGAGCTTTCTAGGTATGCAGAATGGTGATTCAAGCTGTTGGAATGGTGCTCATGGTTGGTCTGATCTTGCAATATACACACCTGGCCCAACTTTTCAATAG 645 0.4977 MQDPFQGVKPPPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKSTKRSSSSTSSKRSSAPSSSSSSSAVSDSDPTRICTNPVDQDPRVLNIGGGSFSSLLASSGHFGTLFEGLNPTGSGLKMGDFGEGVGSDPGLNLDSGSNPDLHVQGNGNSESFLGMQNGDSSCWNGAHGWSDLAIYTPGPTFQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00318 214 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 129 IPR045174 GO:0003700|GO:0006355
Pumo7g00318 214 MobiDBLite consensus disorder prediction 61 114 - -
Pumo7g00318 214 MobiDBLite consensus disorder prediction 1 20 - -
Pumo7g00318 214 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Pumo7g00318 214 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Pumo7g00318 214 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Pumo7g00318 214 MobiDBLite consensus disorder prediction 69 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00318 Pumo-Chr7 4171004 4173254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00318 12 138 C2C2-Dof Transcription Factor Family AT1G51700 58.955 1.34e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pumo7g00318 zf-Dof 2.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00318 - - gmx:100790822 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00318 7 4171004 4173254 Pumo7g00318 7 4171004 4173254 ECH