Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02235 ATGAGAGTTTTCAATTGTTCATCATTCCCCACTCCACCCCTACGTCTTAGTAATTTAATTACCTTAGTAAACACATTGGGTTTCATTCTCTTAATCCTCTTCATATCTGGGATCATCGAGTTCCCATCCTTTTCTTTATTGTCACCTTTCTCAACCTTACCAATCAAAGACCAATCAAATTCATCAAAGGCTTTCACCGATGTGGTTGGTGCATTCAAAAAGTGGGACTCTGAAGTGGGGTGTGCCCGATTCAAGAATGAGAAAAACCAAAGAAATGGTTCAAATAGTTTTTCTACTTCTTTGCAAGATCAATTTGGTGGCCAATTGGAATGTGGGGTGTTGAAAATGAAACATGTGAGCATCTTGGTGAAAGGGTGGACATGGATTCCTGATAATTTAAATAACATGTACATTTGTCCATGTGGATTGAGCTGCTTATGGACAAAGTCGCCAGTTCTTGCTGACAACCCTGATGCCTTCTTGTTTGAAACGACTAAGCCTCCAGCACAAAGAAGCACTGGACAACCACTTCGTGTATACATGGATCTTGAACCTAAAAGAAAGAGATCAGGTAATGAAGAAGTATTTATTAGTTATCATGCCAAGGATGATTTGCAATCAACCTATGCCAGTGCCCTACTCCATAATGGTCGAAATCACTACGTTTCTGCGTATAAGAACAATGTCCCACTTGTTTATTGGTCTTCACCCCCTTGTACACCTCAAAGGAACAAACTTGCCCACAAACTCCTTAGTCTATTGCCTCACCATGCACTTGGCAAATGCCTAAACAATGTTGGAAGAAAAAATAAGGCACTACGTTTGTATCCTGAATGTGTAGATAATGCTGCAAAACTTACCAAATGGTGGAATCATATACACTGTGTGATGTCTCACTACAAGTTTGTCCTTGTAATTGAGAGCACTTGGACTGAAAGTTATGTTACAGAAAAGTTATTTTATGCCTTGGACTCTGGTGCAATTCCAATCTATTTTGGTGCTCCAAATATCATGGATTTTGTGCCTCCTCATTCAATAATAGAAGGGATAAAATTCAAGTCAATGGAAGAATTGGCTTCATATGTGAAGGCCCTGGCAGATGACCCAATAGCCTATGGAGAATTCCATGCATGGAGAAGATGTGGTGTGTTGGGTAACTATGCAAAAACTAGAGCACTAAGCCTTGACACCTTACCTTGTAGGTTATGTCATGCCATTAGCAAAAAAGGGGGAAGAAATGCAGAAGCCTAG 1251 0.4005 MRVFNCSSFPTPPLRLSNLITLVNTLGFILLILFISGIIEFPSFSLLSPFSTLPIKDQSNSSKAFTDVVGAFKKWDSEVGCARFKNEKNQRNGSNSFSTSLQDQFGGQLECGVLKMKHVSILVKGWTWIPDNLNNMYICPCGLSCLWTKSPVLADNPDAFLFETTKPPAQRSTGQPLRVYMDLEPKRKRSGNEEVFISYHAKDDLQSTYASALLHNGRNHYVSAYKNNVPLVYWSSPPCTPQRNKLAHKLLSLLPHHALGKCLNNVGRKNKALRLYPECVDNAAKLTKWWNHIHCVMSHYKFVLVIESTWTESYVTEKLFYALDSGAIPIYFGAPNIMDFVPPHSIIEGIKFKSMEELASYVKALADDPIAYGEFHAWRRCGVLGNYAKTRALSLDTLPCRLCHAISKKGGRNAEA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02235 416 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 115 408 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pumo6g02235 416 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 113 409 - -
Pumo6g02235 416 PIRSF FucT_plant 12 416 IPR017177 -
Pumo6g02235 416 FunFam Alpha-(1,4)-fucosyltransferase 178 384 - -
Pumo6g02235 416 Gene3D - 180 384 IPR038577 -
Pumo6g02235 416 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 238 410 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02235 Pumo-Chr6 41857839 41863050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02235 13 414 Xyloglucan Fucosyltransferase1 AT1G71990 62.531 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02235 K14412 - gmx:100792965 748.043