Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01443 ATGCTGGGCTCAGTGAAGGCCCTTGAGTGGAATGATGAACCAACTGAAGAACATGTAGTGGGTGAATCTCCTCCTCATGGGACTGATGATATGTGTACACAAAATTCTGAGAAGAAAGAGGATAATGCAGTGAATGGCAATGAAGAAAATGAATGGGACAAACTGCTGCGTGTGAGGTGGGAGAAATATCAAAGTGAGGAGGAAGCAGCTCTTGGTCGAGGGAAGCGGCAGAGGAAAGCTGTTTCGTACAGGGAAGTATATGCTCCACATCCAAGTGAAACAATGAGTGAGAGTGGTGAAGAGGAAAAAGAGCCAGAACCAGAGCCTGAGCGTGAATATACACCAGCTGGACGGGCCTTCAAGGCAAAATATGCTAAACTCCGTGCTCGGGCAAAGGAACTATTGGCCCGGAGGAAAGCGATTAAAGAATCAAATCCTGCTGAGGGACTTCCAGGTAATGAGTTACTTACACATTCTCCAGCCATTGCCAAGGGTGGGGATCTAGGGGCTGGACCGATGCATTCAGTTCAGGAGGGGCCTTCTATCAACCTAGAGGACAGCAAATACACACAACTTTCAGAAGCTCAGAATAGCAACACTGACTCCTTATCAAGGATCGATAAGCTTTCAAAACATAAAATGAGCAGTCATTTTGATGCTTCTGTCAGTAATCCAGGTCGTTCTCTCCCTGACATTTTTCTTCCAAGTCACCCTAAAGGGGGGCTGAGCATGACGAACTCTATGCCCACCAACAATTTGTTGCCCGTACTGGGACTTTGTGCTCCTAATGCTAGCCAAATAGAATCATCGGAAAGTAATATTTCGAAGTTAAATTGGAGACAACATAGACATGGATCCAGACAAGAGTTTCCATTCAGTCTTGCCCCTTGCGCTGGGACATCCATGGATGCTGAGGTCAGAAGTAAGGAAATGGCGGCAAATACCAAGCTGGCAGATGCATCAACAGAAAATTTACAACCAAGTTTCAAAAATAGCATCCATGATAACAGTCTCCCATTTGTTCCATTTCCACCCTCTGTGCAAGGAAAGGAATGTGATGCATTTGAAAATTCAGGTGCTAGATTCTCTCATTTTCAGGAGAAGATGGCCTTGCAGAACCTGCCGTTTGATGAAAGGTTGCTGGCTAGATTTCCTCTTACAACCAAGAGCATGCCAAATTCACATCTGGACCTCTTGCCCAATTTGTCTATAGGAGGAAGACTTGAATCTTTGAATGGATCTATGCAAGACCTTCCAACAATGCCAGCTTTGCCTAATTTCAAAATACCCCCTGAAGATTTATTCAGATATAACCAGCAAGACAGGGATGTGCCCCCTACTTTGGGTTTGGGACAAAGGCCAACCACATTCTCATCTTTCCCAGAAAACCATAGAAAGGTTCTTGAAAACATAATGATGAGAACTGGATCTGGATCAAGTAATTTATTGAAAAAGAAGTCAAAATCAGATGGGTGGTCTGAAGATGAACTTGATTCCCTCTGGATTGGTGTTCGTAGGCATGGAAGGGGTAATTGGGATGCTATGCTCAGAGATCCCAAGTTAAAGTTTTCAAAGTATAAAACATCTGAGGACTTATCAGTGAGGTGGGAAGAGGAACAAGTAAAGGTCTTTCAGGGGCCACCTTTTCCAGCACAGAGATCATCCAAGACGATGAAGTCTACCAAATCGGCACATTTTCCAATCTCGGATGGAATGATGGAAAGGGCCTTGCATGGGAGCAAATTTCTTTTGCCACCAAAATTTCAAAACCATCTGACTGACATGAAATTAGGGATAGGTGATTCTGCATCTAGTCTGTCACATTTTAGTACATTGGACCGACCTGGTTTGCAAAATGATCACTTTGTACCTCTTCCATCTTGGAGTTATGATAAAAACAGATCAAAATTTCCTGAAGTTGCTTCTGCTGAACATATGATAGACCAGGTACTTCTTCCAGTGTACTGA 1968 0.4375 MLGSVKALEWNDEPTEEHVVGESPPHGTDDMCTQNSEKKEDNAVNGNEENEWDKLLRVRWEKYQSEEEAALGRGKRQRKAVSYREVYAPHPSETMSESGEEEKEPEPEPEREYTPAGRAFKAKYAKLRARAKELLARRKAIKESNPAEGLPGNELLTHSPAIAKGGDLGAGPMHSVQEGPSINLEDSKYTQLSEAQNSNTDSLSRIDKLSKHKMSSHFDASVSNPGRSLPDIFLPSHPKGGLSMTNSMPTNNLLPVLGLCAPNASQIESSESNISKLNWRQHRHGSRQEFPFSLAPCAGTSMDAEVRSKEMAANTKLADASTENLQPSFKNSIHDNSLPFVPFPPSVQGKECDAFENSGARFSHFQEKMALQNLPFDERLLARFPLTTKSMPNSHLDLLPNLSIGGRLESLNGSMQDLPTMPALPNFKIPPEDLFRYNQQDRDVPPTLGLGQRPTTFSSFPENHRKVLENIMMRTGSGSSNLLKKKSKSDGWSEDELDSLWIGVRRHGRGNWDAMLRDPKLKFSKYKTSEDLSVRWEEEQVKVFQGPPFPAQRSSKTMKSTKSAHFPISDGMMERALHGSKFLLPPKFQNHLTDMKLGIGDSASSLSHFSTLDRPGLQNDHFVPLPSWSYDKNRSKFPEVASAEHMIDQVLLPVY 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01443 655 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 36 577 - -
Pumo6g01443 655 MobiDBLite consensus disorder prediction 32 50 - -
Pumo6g01443 655 Pfam CHD subfamily II, DUF1087 41 85 IPR009463 -
Pumo6g01443 655 MobiDBLite consensus disorder prediction 66 83 - -
Pumo6g01443 655 Coils Coil 124 144 - -
Pumo6g01443 655 MobiDBLite consensus disorder prediction 10 24 - -
Pumo6g01443 655 CDD SANT_TRF 492 536 - -
Pumo6g01443 655 MobiDBLite consensus disorder prediction 66 119 - -
Pumo6g01443 655 SUPERFAMILY Homeodomain-like 491 537 IPR009057 -
Pumo6g01443 655 MobiDBLite consensus disorder prediction 138 180 - -
Pumo6g01443 655 MobiDBLite consensus disorder prediction 1 50 - -
Pumo6g01443 655 SMART DUF1087_2 26 91 IPR009463 -
Pumo6g01443 655 Gene3D - 463 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01443 Pumo-Chr6 19663072 19670417 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01443 6 19663072 19670417 Pumo6g01443 6 19663072 19670417 ECH