Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01427 ATGGCGCCGAGCACCGGAGACGTCCAACTAACTTCCCCCGGCGCCGGCGAAGATTCCGACGACCTCGAAGACGTTCGCCTCCTCGACTCCTACGACAAAAACGACGTCGTCCACGATGAAACGAAGCGGATTCAGGTCAGAATCACCGGCATGACCTGCGCCGCCTGCTCCAACTCCGTCGAAACGGCTCTCAGGTCCGTTAACGGCGTCACCGAAGCCTCCGTTGCTCTTCTTCAAAACAAAGCCGACGTCGTTTTCATCCCCACCCTCGTCAAGGATGAGGACATTAAGAATGCGATTGAAGACGCAGGTTTCGAGGCCGAGATCTTGCCGGACTCCGGCGCGGCGGCGCACGGCGGCGCCGGCGTGGTGGGCCAGTTCACGATCGGCGGGATGACGTGTGCGGCGTGTGTGAATTCCGTGGAGGGCATTTTGAGGAACCTCAACGGAGTGAAGAGAGCGGTGGTGGCTCTGGCTACTTCGTTGGGCGAGGTTGAGTATGATCCCAATGTGATTAGCAAGGATGAGATTGTAACTGCGATTGAAGACGCTGGCTTCGAGGGTTCGTTTGTGCAGAGCAATGGGCAGGACCAGATTGTGTTAGGGGTTAGTGGCGTGTACTCTTTGGGGGATGCTCAGGTTTTGGAAGCGATGCTCAGTGGCACCAAAGGGGTGAGGCAGTTTCGGTTTGACACGGCGTTGAACGAGCTTGATGTGGTGTTTGACCCTCAAGTTATCAGCTCCAGGTCGTTGGTTGATGGGATCCAGTTGGGGAGTAATGGCAAGTTTAAATTGCATGTTAGGAATCCTTATGCTAGGATGGCTTCTAAAGATGGCTCAGAAAGCTCCACTATGTTTCGCCTTTTTATTTCCAGCTTGTTTCTCAGTATTCCTCTTTTCTTCATGGGGGTGATCTGTCCTCATATACCATTGGTGTACTCTTTATTACTTTGGAGATGTGGGCCTTTTCTCATGGGTGATTGGCTGAATTGGGCGTTGGTGAGTGTCATTCAATTTGTGATTGGGAAACGCTTCTATATAGCAGCTGGAAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTGGGAACTACAGCCTCTTATGTTTATTCTGTTTGTGCTCTTCTGTATGGTGCCCTTACAGGATTTTGGTCTCCAACGTACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGCAAGTATTTGGAGTGCCTTGCCAAGGGAAAGACCTCTGATGCCATTAAGAAGCTAGTGGAACTTACTCCTGCAACAGCTTTATTGATTGTCAAAGATAAAGGTGGTAGAACTATTGAAGAAAGGGAAATAGATTCCTTGCTCGTTCAACCCGGTGACACATTAAAAGTTCTTCCTGGTACAAAGATTCCTGCTGATGGTATTGTTACTTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGTGAATCTATACCTGTTTCGAAGCAGGTCAATGCATCTGTTATTGGAGGTACAATCAATTTGCATGGTGTCCTTCACATTCAAGCTACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATTAGTTTGGTGGAGACAGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAGCAAGCATATTTGTGCCTACAGTTGTGGTTTTGGCATTATTGACACTATTGTGTTGGTATATAGCTGGGGCTTTTGGAGCATACCCAGATGAATGGCTGCCAAAAAATGGAAATCACTTTGTTTTTGCCCTTATGTTTTCAATATCTGTTGTGGTGATTGCATGTCCATGTGCACTTGGTTTGGCAACTCCAACTGCGGTCATGGTGGCAACAGGGGTTGGAGCCAACAATGGCGTGTTAATTAAAGGAGGAGACTCCTTGGAAAGGGCTCAGATGGTGAAGTACGTCATATTTGATAAAACAGGCACTCTAACTCAGGGGAAAGCCACTGTTACTGCAGCTAAGGTGTTCGCAGGAATGGACCGTGGAGAATTTCTTACATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCATTGGGAAAAGCAATATTGCAATATGCACGCCATTTTCATTTCTTTGATGACTCTTCTCCTACCAGTGGTACCAAGAATGATGCTGATGAGTTCAAGTCAGGGTGGCTTTATGATGTCTCAGACTTCTCTGCTCTTCCAGGAAGGGGTGTCCAGTGCTTTATAGATGGGAGGCGTATTTTGGTTGGTAACCGGAAGCTGCTGGAGGAAAATGGCATAAATATTTCTACAGAAGTGGAAAATTTTGTTGTAGAGCTTGAAGAAAGTGCAAAGACAGGGATACTAGTAGCATATGATGATATATTAATTGGAGTCTTAGGGATTGCAGACCCACTAAAGAGAGAAGCTGCTGTTGTTATAGAGGGCCTACAGAAAATGGGAGTCATACCTGTTATGGTTACAGGAGATAACTGGAGAACAGCTCGTGCTGTTGCCAAGGAGGTTGGCATTCAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTTGTTCATTCATTCCAAAAGGATGGAAGTATAGTTGCAATGGTGGGTGATGGCATCAATGACTCTCCAGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGGGCCGGGACAGATGTTGCAATAGAAGCTGCTAACTATGTGCTGATGAGAGATAATTTGGAAGATGTGATCACAGCCATTGATATTTCCAAGAAGACCTTTTTCCGGATTCGATTGAATTATGTATTCGCGATGGCTTACAATGTTGTTGCTATACCAGTTGCAGCCGGGGTTTTCTTTCCTTCGTTGGGGATCAAGCTGCCACCATGGGTTGCTGGTGCATGCATGGCTATGTCGTCTGTTAGTGTCGTATGCTCTTCTTTGCTTTTGAAAAGATATAGAAAACCCAAACTTACTACAATACTTGAAATAGTTGTAAATTAA 2979 0.4632 MAPSTGDVQLTSPGAGEDSDDLEDVRLLDSYDKNDVVHDETKRIQVRITGMTCAACSNSVETALRSVNGVTEASVALLQNKADVVFIPTLVKDEDIKNAIEDAGFEAEILPDSGAAAHGGAGVVGQFTIGGMTCAACVNSVEGILRNLNGVKRAVVALATSLGEVEYDPNVISKDEIVTAIEDAGFEGSFVQSNGQDQIVLGVSGVYSLGDAQVLEAMLSGTKGVRQFRFDTALNELDVVFDPQVISSRSLVDGIQLGSNGKFKLHVRNPYARMASKDGSESSTMFRLFISSLFLSIPLFFMGVICPHIPLVYSLLLWRCGPFLMGDWLNWALVSVIQFVIGKRFYIAAGRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLIVKDKGGRTIEEREIDSLLVQPGDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKQVNASVIGGTINLHGVLHIQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVVLALLTLLCWYIAGAFGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDSLERAQMVKYVIFDKTGTLTQGKATVTAAKVFAGMDRGEFLTLVASAEASSEHPLGKAILQYARHFHFFDDSSPTSGTKNDADEFKSGWLYDVSDFSALPGRGVQCFIDGRRILVGNRKLLEENGINISTEVENFVVELEESAKTGILVAYDDILIGVLGIADPLKREAAVVIEGLQKMGVIPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVHSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAANYVLMRDNLEDVITAIDISKKTFFRIRLNYVFAMAYNVVAIPVAAGVFFPSLGIKLPPWVAGACMAMSSVSVVCSSLLLKRYRKPKLTTILEIVVN 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01427 992 ProSitePatterns Heavy-metal-associated domain. 48 78 IPR017969 GO:0046872
Pumo6g01427 992 FunFam Copper-transporting ATPase RAN1 653 745 - -
Pumo6g01427 992 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Pumo6g01427 992 PRINTS P-type cation-transporting ATPase superfamily signature 482 496 - -
Pumo6g01427 992 PRINTS P-type cation-transporting ATPase superfamily signature 813 823 - -
Pumo6g01427 992 PRINTS P-type cation-transporting ATPase superfamily signature 646 660 - -
Pumo6g01427 992 PRINTS P-type cation-transporting ATPase superfamily signature 791 802 - -
Pumo6g01427 992 PRINTS P-type cation-transporting ATPase superfamily signature 889 901 - -
Pumo6g01427 992 Gene3D - 125 190 - -
Pumo6g01427 992 FunFam Copper-transporting ATPase 1, putative 414 536 - -
Pumo6g01427 992 SUPERFAMILY HAD-like 645 972 IPR036412 -
Pumo6g01427 992 Gene3D - 41 112 - -
Pumo6g01427 992 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 23 988 - -
Pumo6g01427 992 SUPERFAMILY HMA, heavy metal-associated domain 126 194 IPR036163 GO:0046872
Pumo6g01427 992 SUPERFAMILY HMA, heavy metal-associated domain 38 112 IPR036163 GO:0046872
Pumo6g01427 992 FunFam Copper-exporting P-type ATPase 746 797 - -
Pumo6g01427 992 NCBIfam heavy metal translocating P-type ATPase 360 975 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pumo6g01427 992 Gene3D - 414 536 - -
Pumo6g01427 992 NCBIfam copper ion binding protein 44 107 IPR006122 GO:0005507
Pumo6g01427 992 NCBIfam copper ion binding protein 126 187 IPR006122 GO:0005507
Pumo6g01427 992 ProSitePatterns Heavy-metal-associated domain. 129 158 IPR017969 GO:0046872
Pumo6g01427 992 MobiDBLite consensus disorder prediction 1 22 - -
Pumo6g01427 992 CDD P-type_ATPase_Cu-like 287 963 - -
Pumo6g01427 992 FunFam Copper-exporting P-type ATPase A 124 191 - -
Pumo6g01427 992 FunFam Probable copper-transporting ATPase HMA5 771 923 - -
Pumo6g01427 992 Pfam haloacid dehalogenase-like hydrolase 642 880 - -
Pumo6g01427 992 CDD HMA 45 108 IPR006121 GO:0046872
Pumo6g01427 992 FunFam Copper-exporting P-type ATPase A 40 110 - -
Pumo6g01427 992 CDD HMA 126 187 IPR006121 GO:0046872
Pumo6g01427 992 ProSitePatterns E1-E2 ATPases phosphorylation site. 648 654 IPR018303 -
Pumo6g01427 992 ProSiteProfiles Heavy-metal-associated domain profile. 42 108 IPR006121 GO:0046872
Pumo6g01427 992 SFLD p-type atpase 628 917 IPR044492 -
Pumo6g01427 992 Gene3D - 653 746 IPR023299 GO:0000166
Pumo6g01427 992 Gene3D - 747 797 IPR023299 GO:0000166
Pumo6g01427 992 Pfam E1-E2 ATPase 427 625 - -
Pumo6g01427 992 Pfam Heavy-metal-associated domain 127 187 IPR006121 GO:0046872
Pumo6g01427 992 Pfam Heavy-metal-associated domain 46 106 IPR006121 GO:0046872
Pumo6g01427 992 ProSiteProfiles Heavy-metal-associated domain profile. 123 189 IPR006121 GO:0046872
Pumo6g01427 992 NCBIfam HAD-IC family P-type ATPase 399 666 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo6g01427 992 NCBIfam HAD-IC family P-type ATPase 745 950 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo6g01427 992 SUPERFAMILY Calcium ATPase, transduction domain A 446 532 IPR008250 -
Pumo6g01427 992 PRINTS Copper-transporting ATPase 1 signature 69 92 - -
Pumo6g01427 992 PRINTS Copper-transporting ATPase 1 signature 98 118 - -
Pumo6g01427 992 PRINTS Copper-transporting ATPase 1 signature 43 68 - -
Pumo6g01427 992 Gene3D - 613 923 IPR023214 -
Pumo6g01427 992 SFLD Haloacid Dehalogenase 628 917 - -
Pumo6g01427 992 SUPERFAMILY Calcium ATPase, transmembrane domain M 383 952 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01427 Pumo-Chr6 19519147 19525101 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01427 6 19519147 19525101 Pumo6g01427 6 19519147 19525101 ECH