Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01423 ATGATGGAGATGAGTATGTTGGGTTGTTCGTTCCCTGGCTACGCAAAACCCTTTGCAATTGCAAGAGTAAACCCTTCTCTTCTTACGCTCAGGGCATCTTCTCTGCGCCATGACTACCCCCTTGCAAGCAAAATTGTTGTTAAAAATTTACCGTATTCTACAGGTGAGATTACTTTGCAGAAGGAATTTTCAAATTTTGGCAAGATAGCTGAAGTTAAAATGGTTAAAGATATGAACACAAAACGATCCAAGGGTATTGCTTTCATTCAATATACATGTCAAGATGAGGCCATGCTTGCACTAGAAACCATGGATCAGAAGGATTTTTATGGTCGAACAATCTACGTGGAAATTGCAAGACTGGGTTGGGATGATTTTGGTGCATCCCCAAGGGCCTCAGGACCCCCAAAGAAGTGGGATTTGCCAGAGCAAGGGGAAGTGGTAGATTGTTGGTACTGA 459 0.427 MMEMSMLGCSFPGYAKPFAIARVNPSLLTLRASSLRHDYPLASKIVVKNLPYSTGEITLQKEFSNFGKIAEVKMVKDMNTKRSKGIAFIQYTCQDEAMLALETMDQKDFYGRTIYVEIARLGWDDFGASPRASGPPKKWDLPEQGEVVDCWY 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01423 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 45 114 IPR000504 GO:0003723
Pumo6g01423 152 Gene3D - 31 145 IPR012677 -
Pumo6g01423 152 CDD RRM_SF 45 117 - -
Pumo6g01423 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 43 121 IPR000504 GO:0003723
Pumo6g01423 152 SMART rrm1_1 44 117 IPR000504 GO:0003723
Pumo6g01423 152 SUPERFAMILY RNA-binding domain, RBD 33 123 IPR035979 GO:0003676
Pumo6g01423 152 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 43 141 - -
Pumo6g01423 152 FunFam glycine-rich RNA-binding protein 4, mitochondrial 31 146 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01423 6 19465631 19469067 Pumo6g01423 6 19465631 19469067 ECH