Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01419 ATGAGATTCTCAGTGGTGTATTTTGTCTCATTATTGGTGGTGGTAGAACTAGAAGAAACCACCACATGTTTCACTTTCAACACAGAGAAAAAGCTGTCAGAATTCAAACACAAACTTGATCAAAAGTTAGCCGCTCCTTTGGCCTCACCAGCAGTACCTGCTAATTCCTCTAAGAGTGGGAGGGTGTTGTACGTGAGTGAATATGGTGCAGACCCAACAGGGAATGAAGAAAGCAGTGATGCCATTTTGAAAGCTGTTGAAGATGCTTTTGCTTTGCAGAAGGGTCTTGAGTTGGTTGGAGGGGTGAATGACCTTGGAGGGGTTGTGATTGATTTGGAAGGTGGGAACTACAAAATCAGCAAACCCATTACATTCCCTTCATCTGGTGGTGGCAATGTTGTGGTAAAAGGAGGAACATTGAGAGCATCTGATACATTTCCTGGTGATCGACATCTAGTTGAGTTATGGTCATCAAATTCCGGGAAACTTGAGACAAAAGAATCTCTGAATGCTGATATCTTCAAAAGCATCAAAGCCCAAAACAATGCAATTTACTATGAAGACATTACTTTCCGGGACATCCTCTTTGATTCATCCTATAGAGGAGGAGGGATTTTCGTCGTTGATTCGGCCAGAACCCGGATCAACAATTGCTTCTTCCTTCATTTCACCACAGAAGGAATCCTAGTCCAGCAAGGACATGAGACCTTCATATCAAGTTGTTTTCTTGGGCAACACTCAACCGTCGGAGGAGACAAAGGAGAGAAGGACTTCTCAGGGGTGGCCATTGATCTTGCTAGCAATGACAATGCAGTCACAGATGTTGCAATTTTCTCAGCAGCCATTGGTGTTGTGCTAAGGCGTCAAGCCAACATTCTAACTGGGGTGCATTGTTATAACAAGGCAACATCTTTTGGTGGCATAGGCATCTTAGTGAAATTGGCAGGTAATTCACTAACTAGAATTGACAACTGTTATCTGGATTACACTGGAATAGTCATGGAAGACCCTGTGCAAGTTCATGTCACAAATGGGTTGTTTCTAGGGGATGCTAATATTGTATTGAAGTCTATTAAAGGTCAAATTTTGGGCCTAAATATAGTGGATAACATGTTTAATGGTGACCCCAATAAGAAGGTTCCTATTGTAAATCTAGATGGGGAATTTGGTAGCATTGATCAAGTGGTGATTGATCGCAACAATGTGAATGGAATGGGCTTGAGATCAACGGTTGGGAAGTTAACTGCGAGTGGAAATGGCACAAAGTGGGTGGCTGATTTTTCATCAGTCTTGGTGTTTCCCAATAGGATTAGTCATTTTCAATATTCATTTTATGCTCAAGATGAGCCTAAATTTGTAGCACTTTCTGTGACCAATGTGTCAGATAATGTCGTTGTTGTGGAGAGTGAGAAAGAAGCTAAAGGGTTCGTCTCCTTCATAGTTGAACAATAA 1452 0.418 MRFSVVYFVSLLVVVELEETTTCFTFNTEKKLSEFKHKLDQKLAAPLASPAVPANSSKSGRVLYVSEYGADPTGNEESSDAILKAVEDAFALQKGLELVGGVNDLGGVVIDLEGGNYKISKPITFPSSGGGNVVVKGGTLRASDTFPGDRHLVELWSSNSGKLETKESLNADIFKSIKAQNNAIYYEDITFRDILFDSSYRGGGIFVVDSARTRINNCFFLHFTTEGILVQQGHETFISSCFLGQHSTVGGDKGEKDFSGVAIDLASNDNAVTDVAIFSAAIGVVLRRQANILTGVHCYNKATSFGGIGILVKLAGNSLTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDANIVLKSIKGQILGLNIVDNMFNGDPNKKVPIVNLDGEFGSIDQVVIDRNNVNGMGLRSTVGKLTASGNGTKWVADFSSVLVFPNRISHFQYSFYAQDEPKFVALSVTNVSDNVVVVESEKEAKGFVSFIVEQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01419 483 FunFam Polygalacturonase QRT3 65 478 - -
Pumo6g01419 483 SUPERFAMILY Pectin lyase-like 61 404 IPR011050 -
Pumo6g01419 483 PANTHER POLYGALACTURONASE QRT3 9 483 IPR039279 GO:0004650
Pumo6g01419 483 Gene3D - 65 477 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01419 Pumo-Chr6 19429540 19434533 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01419 6 19429540 19434533 Pumo6g01419 6 19429540 19434533 ECH