Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01389 ATGGGAAGGAGCACTTTGGCTTTGGTTCTCGCGATTCTGATCTCTTTGCAGGGAACCCACGTTAGATCCGATGCCTCCGATCACCGTTACAAGGATGGAGACTCCGTTCCTCTTTACGCCAACAAAGTCGGTCCCTTTCACAACCCCAGTGAAACGTATCGGTACTTTGACCTGCCATTCTGTGTAACAGGTAAGGAGAGAGAAAAGACTGAAGCCCTCGGTGAGGTGTTGAATGGCGATCGCCTTGTTAGTGCTCCTTATGAACTTAGTTTCAAAACGGAGAAAGACTCTAAGGTTGTATGCAAGAGGAAGCTCACAAAGGAGCAAGTTGCTCAGTTCCGAGAAGCAGTTAAGAAGGACTATTATTTCCAGATGTATTATGATGACTTGCCAATCTGGGGATTTATTGGGACTGTTGACAAGGAAGGAAAAACTGACCCTAGTGAATACAAGTATTTTCTTTACAAGCACATTCAGTTTGATATTCTTTACAACAAAGATCGAGTGATTGAAATCAGTGCCCGGATGGATCCTCATTCTGTGGTGGACCTGACTGAGGATAAAGATGTTGATGTTGAGTTCATGTACACTGCAAAATGGAAGGAAACAGATACACCTTTTGAGAAGAGAATGGATAAATACTCTCAGTCCTCTTCTTTGCCACATCACTTGGAGATTCACTGGTTCTCAATCATAAACTCTTGTGTAACAGTTCTTCTTTTGACTGGTTTTCTGGCAACCATTCTCATGCGTGTATTGAAGAATGACTTTATGAAGTATGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAGACAGGATGGAAGTACATTCATGGTGATGTTTTCCGGTTTCCAAAGTACAAGTCTTTCTTTGCAGCAGCCCTTGGTTCTGGTACTCAGTTATTCACACTTACAATCTTCATTTTTATGCTTGCACTGGTTAGGAACTTATTGCTGACAGGATGCCTCTTTTGTGGCCCCCTTTTCCTTATGTTCTGCTTCCTTAACACAGTTGCAATTGCTTATAGTGCAACTGCTGCCCTGCCATTTGGCACAATTGTGGTGATAGTCCTAATATGGACATTGGTAACTTCACCATTGCTTGTGTTGGGTGGTATTGCTGGTAAAAATAGCAAAACTGAGTTCCAAGCACCTGTCCGCACTACAAAATATCCCCGAGAGATTCCACCTCTGCCTTGGTACAGGAGTACCCTTCCCCAGATGGCAATGGCAGGATTTCTCCCCTTTAGTGCCATCTACATAGAGCTGTACTACATTTTTGCTAGTGTATGGGGCCACAGAATTTATACCATCTACAGCATACTCTTCATTGTCTTCATTATTCTGTTGATTGTCACTGCTTTCATCACTGTGGCTTTGACATACTTCCAACTTGCTGCCGAGGATCATGAATGGTGGTGGAGGTCTTTCCTTTGTGGTGGATCAACTGGCTTGTTCATCTACGGCTACTGCTTGTATTACTACTATGCACGATCAGATATGTCTGGTTTTATGCAAACTTCATTCTTCTTCGGTTACATGGCCTGCATCTGCTATGGCTTCTTCCTCATGCTTGGTAGCGTAGGTTTCCGTGCCTCCCTGCTCTTTGTTCGTCACATATACAGGTCCATCAAGTGTGAGTAG 1647 0.4366 MGRSTLALVLAILISLQGTHVRSDASDHRYKDGDSVPLYANKVGPFHNPSETYRYFDLPFCVTGKEREKTEALGEVLNGDRLVSAPYELSFKTEKDSKVVCKRKLTKEQVAQFREAVKKDYYFQMYYDDLPIWGFIGTVDKEGKTDPSEYKYFLYKHIQFDILYNKDRVIEISARMDPHSVVDLTEDKDVDVEFMYTAKWKETDTPFEKRMDKYSQSSSLPHHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFMKYAQDEEAADDQEETGWKYIHGDVFRFPKYKSFFAAALGSGTQLFTLTIFIFMLALVRNLLLTGCLFCGPLFLMFCFLNTVAIAYSATAALPFGTIVVIVLIWTLVTSPLLVLGGIAGKNSKTEFQAPVRTTKYPREIPPLPWYRSTLPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01389 548 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 23 316 IPR004240 GO:0016020
Pumo6g01389 548 Pfam Endomembrane protein 70 52 316 IPR004240 GO:0016020
Pumo6g01389 548 Pfam Endomembrane protein 70 316 505 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01389 Pumo-Chr6 18705314 18711530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01389 4 548 Miscellaneous Gene Families AT2G01970 82.313 0.0 970
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01389 6 18705314 18711530 Pumo6g01389 6 18705314 18711530 ECH