Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00794 ATGGTGGAGATTCACGAAGAAATCAACCCTTTTGATCAAGAAGAAAATGAAGAAATCGACTATGACCAGCTTAAGAAGCGGATGTGGAAGGATCGGATCCTGCTGCAGAAGCTAAAGGAGAAACGCCCCAAAGAAGAGCCAGACCAACAAGCAAAACAAGAAGCATCTAGGCGGAAGAAGATGTCAAGAGCACAAGACTCAATCCTCAAATACATGGTGAAGATTATGGAAGTTTGCAATGCTCAAGGTTTTGTGTATGGGATTGTCCCTGAGAAAGGTAAGCCAGTGACTGGTTCTTCTGACAGCTTGCGTGAGTGGTGGAAAGAAAAGGTTCCTATATACATCTCCTTAATGACTTGCAAGACACTACTTTCTGCTCTCATGCAACATTGCATGCCTCCCCAAAGAAGATTCCCTCTTGAGAGAGGCTTGGCTCCACCTTGGTGGCCCACAGGGACAGAAAATTGGTGGGGTGAACAAGGCCTTCTGGCCCAAGAACATGGCCCACCTCCTTATAAGAAGCCCCATGACCTCAAAAAGGCTTGGAAAGTGTCTCTCTTGGCTGCAGTCATCAAACACATTTCTCCTGATTTGGACAAACTCAGAAGGCTGGTGACTCAGTCCAAGACTTTGCAAGACAAGATGACAGCAAAGGACACAGCAACTTGGTCCAAGGTCATGAACCAAGAAGAAGCTCTGCTGCAACTGGCCAACAAGTGCCTCAAAATATCTTCGTCAGAGGAAGATGAAAACGAGTCTGAAAGCTCTACTAGTACTATCATCAATGAAGGGAGTCGTGTTACTGAGTTGAATGATGATTCCAATTTAGGTGGTGGCAGCATTGAGAAAAGGAAGAGTGACGTGTTTGACTTAGATGCTGTTGTGGATAAGCTATATGCTTGTCAATACTATCAGTGTCCACAAAGTGAAATGGGTACGGGATTTCCCGACAAAAACTCAAGGATGAACCATGAGTCCCTCTGTTCTTACCGCACTAACCAAAGCCAACCTGTTCTCCTTCATGATCATCCGTCCAATGATGACACACAAATTTCAAGTGTGGATGATTGGATGAACATGGAGGTAGCAAGAGCTAATCAGAATGAGAATGGCCTTGTTAGGATCTGA 1128 0.4495 MVEIHEEINPFDQEENEEIDYDQLKKRMWKDRILLQKLKEKRPKEEPDQQAKQEASRRKKMSRAQDSILKYMVKIMEVCNAQGFVYGIVPEKGKPVTGSSDSLREWWKEKVPIYISLMTCKTLLSALMQHCMPPQRRFPLERGLAPPWWPTGTENWWGEQGLLAQEHGPPPYKKPHDLKKAWKVSLLAAVIKHISPDLDKLRRLVTQSKTLQDKMTAKDTATWSKVMNQEEALLQLANKCLKISSSEEDENESESSTSTIINEGSRVTELNDDSNLGGGSIEKRKSDVFDLDAVVDKLYACQYYQCPQSEMGTGFPDKNSRMNHESLCSYRTNQSQPVLLHDHPSNDDTQISSVDDWMNMEVARANQNENGLVRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00794 375 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 121 339 IPR006957 GO:0003700|GO:0005634
Pumo6g00794 375 MobiDBLite consensus disorder prediction 38 62 - -
Pumo6g00794 375 Pfam Ethylene insensitive 3 23 111 IPR047091 GO:0003700
Pumo6g00794 375 Pfam Ethylene insensitive 3 119 231 IPR047091 GO:0003700
Pumo6g00794 375 Gene3D - 50 116 IPR023278 GO:0003700|GO:0005634
Pumo6g00794 375 Gene3D - 117 240 IPR023278 GO:0003700|GO:0005634
Pumo6g00794 375 MobiDBLite consensus disorder prediction 244 282 - -
Pumo6g00794 375 SUPERFAMILY DNA-binding domain of EIN3-like 119 234 IPR023278 GO:0003700|GO:0005634
Pumo6g00794 375 MobiDBLite consensus disorder prediction 255 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00794 Pumo-Chr6 9751993 9753202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00794 1 334 EIL Transcription Factor Family AT5G10120 52.116 1.32e-120 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pumo6g00794 EIN3 2.4e-55 No_clan