Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00177 ATGAGAACCCAACGGCTTCACCATCTCCTTCTCTCCCTCTTCCTCTTCGCAGCCGCATTCTCCAGCCTCCACCCGACGGCCACCGCCGGATACGACGCCGCACCCCCCGCGGGCGACGGCAACGGCGACGCCGATTTCATCCGCACCAGCTGCAACACCACGCTCTACCCCGACGTGTGCTTCACCTCCCTCTCTCGCTACGCCAATGCGGTGCAGCAGAGCCCCGGCCAGCTGGCGCGCGTCGCCATCTCCGTGAGCCTCTCGAAGGTCCACCGCGCCGCCTCCTACGTCTCCAACCTCACTCGCGACGCCGACTACGGCGGCAGCACGCGCTCCGCGCTCGCCCTGCACGACTGCTTCTCGAACCTGGGCGACGCCGTGGACGAAATCCGCGGCTCGCTGAAGCAGATGCGCCAGATTGGAGCCGCGGGCTCCGGCGCGAGCTCGTTCCTGTTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCCGCACTCACCGACGAAGAGACCTGTACGGACGGCTTCCAGGACGTAGCTGACTGTCCCGTGAAAACGGATGTATGCGATCGCGTCACCAATGTCAAGAAGTTCACCAGCAATGCCTTGGCGCTCGTCAACTCCTACGCCAACAAGGGAATGCCTTGA 645 0.645 MRTQRLHHLLLSLFLFAAAFSSLHPTATAGYDAAPPAGDGNGDADFIRTSCNTTLYPDVCFTSLSRYANAVQQSPGQLARVAISVSLSKVHRAASYVSNLTRDADYGGSTRSALALHDCFSNLGDAVDEIRGSLKQMRQIGAAGSGASSFLFQMSNVQTWMSAALTDEETCTDGFQDVADCPVKTDVCDRVTNVKKFTSNALALVNSYANKGMP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00177 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 204 - -
Pumo6g00177 214 SMART PMEI_2 42 204 IPR006501 GO:0004857
Pumo6g00177 214 FunFam Pectin methylesterase inhibitor 1 42 208 - -
Pumo6g00177 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 208 IPR035513 -
Pumo6g00177 214 CDD PMEI-like_3 49 210 - -
Pumo6g00177 214 NCBIfam pectinesterase inhibitor domain 14 208 IPR006501 GO:0004857
Pumo6g00177 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 208 IPR035513 -
Pumo6g00177 214 Pfam Plant invertase/pectin methylesterase inhibitor 45 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00177 Pumo-Chr6 2131267 2131964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00177 47 207 Carbohydrate Esterase AT3G14310 24.691 8.42e-14 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00177 6 2131267 2131964 Pumo6g00177 6 2131267 2131964 ECH