Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02582 ATGGAATTTCTATGCTTGTTGTATGTTCTGCTAGCTTGGTGTCTGTCAAGTTCTGAACTTGTTGGTGCTGAGCTTCAGGACCAAGATATATTACATGCCATCAACCAAGAGCTTAGAGTCCCTGGATGGGGGGATGCCAACAACTCAGATTACTGCACTTGGCAAGGTGTCAACTGTGGTAACAACTCAATGGTGGAGGGCTTGGATCTGTCTCACCGGAATCTTCGAGGTAATGTAACTCTAATGTCTGAGCTCAAAGCTTTGAAGCGGCTTGATCTTTCTAATAATAACTTTGATGGATCGATTCCTCCCGCTTTTGGAAATTTATCTGATCTTGAAGTTCTAGATTTGTCTTCAAATAAGTTTCAAGGTTCAATTCCACCTCAGTTGGGTGGTCTCAGAAACCTCAAATCATTGAACCTTTCCAATAATGTGCTTGTGGGAGAGATACCAATGGAACTTCAGGGCTTAGAGAAATTGCAGGATTTTCAAATTTCTAGTAATCATTTGAGTGGTCTTATACCTTCTTGGGTGGGAAATTTAACCAATTTGAGACTTTTCACTGCTTATGAGAACCGTTTAGATGGCAGGATTCCAGATGATCTAGGCTCGATTTCTGACCTTCAAATACTTAACCTGCACTCTAACCAGCTTGAAGGTCCAATACCAGCAAGCATTTTTGTGCCAGGGAAGTTGGAAGTTCTGGTTCTCACCCAGAATAATTTTGGTGGTGAACTTCCTAAGGAAATTGGGAATTGCAAAGCCCTTTCTAGCGTTCGAATTGGAAACAACCTCCTAGTAGGTACCATTCCTAAGACCATTGGAAATCTTAGTAGCCTTACCTACTTTGAAGCTGACAATAATAATCTTTCTGGTGAGGTTGTGTCTGAATTTGCTCAGTGTTCTAATCTGACCCTCCTGAATTTGGCTTCAAATGGATTTAATGGAACAATTCCAGAAGACTTTGGACTGCTTATGAACCTTCAGGAATTAATTCTTTCTGGAAATAGCCTATTTGGCGACATTCCAAAATCAATTCTGAGTTGCAAAAGTCTTAACAAGCTTGATATTAGCAACAACAGATTCAATGGGACAATACCAAATGAAATCTGCAATATCACCCGGTTGCAGTACTTGCTGTTGGATCAGAATTTCATAAGAGGAGAGATCCCCCACGAAATTGGAAATTGTGCAAAACTTCTTGAATTACAATTGGGCAGTAATATTTTGACTGGAACTATTCCTCCTGAGATTGGCCGCATTAGGAACTTACAGATAGCTTTAAATTTGAGCTTCAATCATCTTCATGGACCACTGCCCCCTGAATTAGGAAAACTGGACAAACTTGTTTCTCTGGATGTTTCAAACAATCGGCTATCAGGTAATATCCCACCTGAGCTTAAGGGAATGTTGAGCTTGATAGAGGTGAACTTCTCAAACAATCTGTTAGGAGGTCCTGTGCCAACATTTGTACCATTCCAGAAGAGTCCTAGTTCAAGCTTTTTCGGCAATAAAGAGCTTTGTGGAGAGCCTTTGAACTCTTCATGTGGAGACCTTTATGATGATCACAAGGCTTACCATCACAGGGTTTCTTACAGAATCATACTGGCTGTAATTGGTTCTGGTTTGGCTGTTTTTATGTCAGTAACTATAGTTGTCTTGCTGTTTATGATGAGGGAGAGGCAAGAAAAAGTAGCCAAAGATGCTGGGATTGTTGAAGATGGCGCCAATGACAACCCAACTATAATTGCAGGGACTGTTTTTGTTGATAATCTAAAACAAGCAGTAGACCTTGATGCCGTCGTTAAAGCAACTCTGAAAGACAGTAACAAGCTCAACAGTGGAACTTTCAGCACTGTCTACAAGGCAATCATGCCTTCTGGGGTGGTGTTATCTGTTAGGAGACTGAAGTCTGTAGACAAGACAATAATCCACCATCAGAACAAGATGATTAGAGAACTTGAAAGACTCAGCAAAGTTTGTCATGATAATCTTGTGCGTCCCATTGGCTATGTCATTTATGAAGATGTTGCTCTTCTCTTGCATCATTATTTTCCAAATGGAACATTGGCTCAGCTTCTTCATGAATCTACCAGGAACCCTGAATATCAGCCTGACTGGCCTTCAAGATTATCCATTGCCATTGGTGTGGCAGAGGGTTTGGCTTTCCTTCATCATGTGGCAATCATCCATCTTGATATTTCTTCTGGCAACGTTCTCTTGGATGCAAATTCCAAGCCGTTGGTTGGGGAGATCGAGATTTCAAAACTTCTGGATCCAACCAAAGGCACTGCAAGTATTAGTGCAGTTGCTGGTTCCTTTGGTTACATACCACCAGAATATGCTTATACCATGCAAGTCACAGCACCAGGAAATGTTTATAGCTATGGTGTTGTTCTGTTGGAGATCCTCACAACTAGACTACCAGTTGATGAGGATTTTGGTGAAGGTGTAGATTTGGTGAAATGGGTTCATAGTGCTCCAGTAAGAGGGGAAACTCCAGAGCAGATACTGGATGCCAAGCTTAGCACTGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCTTTGAAGGTCGCGTTGCTGTGCACTGACAACACACCAGCCAAACGACCGAAAATGAAGAATGTCGTGGAAATGCTTCGAGAGATAAAACAAAATTGA 2664 0.4148 MEFLCLLYVLLAWCLSSSELVGAELQDQDILHAINQELRVPGWGDANNSDYCTWQGVNCGNNSMVEGLDLSHRNLRGNVTLMSELKALKRLDLSNNNFDGSIPPAFGNLSDLEVLDLSSNKFQGSIPPQLGGLRNLKSLNLSNNVLVGEIPMELQGLEKLQDFQISSNHLSGLIPSWVGNLTNLRLFTAYENRLDGRIPDDLGSISDLQILNLHSNQLEGPIPASIFVPGKLEVLVLTQNNFGGELPKEIGNCKALSSVRIGNNLLVGTIPKTIGNLSSLTYFEADNNNLSGEVVSEFAQCSNLTLLNLASNGFNGTIPEDFGLLMNLQELILSGNSLFGDIPKSILSCKSLNKLDISNNRFNGTIPNEICNITRLQYLLLDQNFIRGEIPHEIGNCAKLLELQLGSNILTGTIPPEIGRIRNLQIALNLSFNHLHGPLPPELGKLDKLVSLDVSNNRLSGNIPPELKGMLSLIEVNFSNNLLGGPVPTFVPFQKSPSSSFFGNKELCGEPLNSSCGDLYDDHKAYHHRVSYRIILAVIGSGLAVFMSVTIVVLLFMMRERQEKVAKDAGIVEDGANDNPTIIAGTVFVDNLKQAVDLDAVVKATLKDSNKLNSGTFSTVYKAIMPSGVVLSVRRLKSVDKTIIHHQNKMIRELERLSKVCHDNLVRPIGYVIYEDVALLLHHYFPNGTLAQLLHESTRNPEYQPDWPSRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANSKPLVGEIEISKLLDPTKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVDEDFGEGVDLVKWVHSAPVRGETPEQILDAKLSTVSFGWRKEMLAALKVALLCTDNTPAKRPKMKNVVEMLREIKQN 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02582 887 Gene3D Ribonuclease Inhibitor 170 227 IPR032675 -
Pumo5g02582 887 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 685 887 - -
Pumo5g02582 887 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 226 519 - -
Pumo5g02582 887 Pfam Leucine rich repeat 327 384 IPR001611 GO:0005515
Pumo5g02582 887 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Pumo5g02582 887 Gene3D Phosphorylase Kinase; domain 1 577 684 - -
Pumo5g02582 887 Pfam Protein tyrosine and serine/threonine kinase 609 881 IPR001245 GO:0004672|GO:0006468
Pumo5g02582 887 Gene3D Ribonuclease Inhibitor 25 169 IPR032675 -
Pumo5g02582 887 Gene3D Transferase(Phosphotransferase) domain 1 685 887 - -
Pumo5g02582 887 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 576 684 - -
Pumo5g02582 887 Gene3D Ribonuclease Inhibitor 228 518 IPR032675 -
Pumo5g02582 887 ProSitePatterns Tyrosine protein kinases specific active-site signature. 729 741 IPR008266 GO:0004672|GO:0006468
Pumo5g02582 887 SUPERFAMILY L domain-like 198 513 - -
Pumo5g02582 887 ProSiteProfiles Protein kinase domain profile. 606 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g02582 887 SUPERFAMILY Protein kinase-like (PK-like) 606 884 IPR011009 -
Pumo5g02582 887 SUPERFAMILY L domain-like 40 293 - -
Pumo5g02582 887 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 287 886 - -
Pumo5g02582 887 SMART LRR_typ_2 446 469 IPR003591 -
Pumo5g02582 887 SMART LRR_typ_2 157 180 IPR003591 -
Pumo5g02582 887 SMART LRR_typ_2 373 397 IPR003591 -
Pumo5g02582 887 SMART LRR_typ_2 109 133 IPR003591 -
Pumo5g02582 887 SMART LRR_typ_2 85 108 IPR003591 -
Pumo5g02582 887 SMART LRR_typ_2 205 229 IPR003591 -
Pumo5g02582 887 SMART LRR_typ_2 325 349 IPR003591 -
Pumo5g02582 887 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 25 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02582 Pumo-Chr5 71249508 71253680 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo5g02582 PK_Tyr_Ser-Thr 8e-27 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02582 5 71249508 71253680 Pumo5g02582 5 71249508 71253680 ECH