Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02491 ATGGCATCAAGACCCATCGTTGAACAACAGGCCAGAGGTGAAGCAGCAGTAGAGGGAGGAAAACAGCAGAAGAAGAAGGGTGTAGCGGATGGAAGGAGCCGCAAGGTATTAGGTGATATTGGGAATTTGGTCAATGTAAGAGGTGTTGAAGTCAAGCCCAATCGCCCCATCACAAGGAGTTTTGGTGCCCAACTACTTGCCAATGCGCAAGCACCAGCAGCTGCTAAGAATAATAACAAGAAACAGGCTTCTGCCAATGTGGCTGGACCTCCACCTGTTGCTAATGCAATTGCAGTGGCCAAAAGAGTGGCTCCCAAACAATGTCAGAAGAAAGTCACTGTAAAACCAAAACTTGAGGAAGCCATTGGCATTGAAGCTAGCCCAGACAAGGAGGTCCAGAAAGACAATAAAAAGGAAGGACATGCCAACTCCAAGAAGAGATCACTTACTTCTGTGCTCACAACTCGAAGCAAAGAGGCAACATGCAGCATAACTAACAAACCAAAGGAGCAGATTATTGACATTGATGCTGGCGATGTTGACAATGAGCTTGCTGCTGTGGAGTATATTGGTGACATTTACAAGTTTTATAAACTTGTTGAGAACGAGAGTCGCCCCCATGACTACATGGACTCACAACCTGAGATAAATGAGAGAGTAAGAGCTATAGTGGTTGATTGGCTGATATATGTTCACACCAGGTTTAACCTTTCTCCTGAGACCCTTTACTTGACCATCAATATAATCGATCGGTTCCTAGCAGTTCAGACAGTTCCAGCGAGGGAACTGCGATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATGTGCCCCCCTAGGGTAAATCACTTTGTCTGCATCTCAGATAGGGCATACACTTGTGAACAGATACTGGTTATGGAGAAAATCATACTGGCCAAGCTGGAATGGATTTTGACTGTGCCTACACCTTTGGTTTTCCTACTTCGTTTTATCAAGGCATCGGTCCCAGATCAGGAGTTGGAAAACATGACCCATTTTCTGTCTGAGTTGGGAATGATGTACTATGCTACCTTAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGGTGCACTCTGAATAAGTCTCCCCTTTGGAATGAGACACTTAAGCTGCACACTGGCTATTCACAAGAACAACTTATGGATTGTGCTAGATTATTGGTGAGCTTCCACTCCATGGTTGGGAATGGAGAGCAGAAGGTTGTGTACATAAAGTATTCTGATCCTCATAAAGGAGCTGTAGCTATGCTCCCACCAGCTAAAAATCTTCTGCTTGAAGGTTCTGCCTCTCAATAG 1344 0.4509 MASRPIVEQQARGEAAVEGGKQQKKKGVADGRSRKVLGDIGNLVNVRGVEVKPNRPITRSFGAQLLANAQAPAAAKNNNKKQASANVAGPPPVANAIAVAKRVAPKQCQKKVTVKPKLEEAIGIEASPDKEVQKDNKKEGHANSKKRSLTSVLTTRSKEATCSITNKPKEQIIDIDAGDVDNELAAVEYIGDIYKFYKLVENESRPHDYMDSQPEINERVRAIVVDWLIYVHTRFNLSPETLYLTINIIDRFLAVQTVPARELRLVGISAMLMASKYEEMCPPRVNHFVCISDRAYTCEQILVMEKIILAKLEWILTVPTPLVFLLRFIKASVPDQELENMTHFLSELGMMYYATLMYCPSMVAASAVFAARCTLNKSPLWNETLKLHTGYSQEQLMDCARLLVSFHSMVGNGEQKVVYIKYSDPHKGAVAMLPPAKNLLLEGSASQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02491 447 FunFam G2/mitotic-specific cyclin-1 313 431 - -
Pumo5g02491 447 PIRSF Cyclin_A_B_D_E 1 447 IPR046965 GO:0016538|GO:0044772
Pumo5g02491 447 SMART Cyclin_C_2 319 436 IPR004367 -
Pumo5g02491 447 Pfam Cyclin, N-terminal domain 192 316 IPR006671 -
Pumo5g02491 447 FunFam G2/mitotic-specific cyclin 205 312 - -
Pumo5g02491 447 Gene3D - 312 445 - -
Pumo5g02491 447 MobiDBLite consensus disorder prediction 127 152 - -
Pumo5g02491 447 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
Pumo5g02491 447 Pfam Cyclin, C-terminal domain 319 435 IPR004367 -
Pumo5g02491 447 SUPERFAMILY Cyclin-like 318 437 IPR036915 -
Pumo5g02491 447 CDD CYCLIN_AtCycB-like_rpt2 319 435 - -
Pumo5g02491 447 MobiDBLite consensus disorder prediction 1 33 - -
Pumo5g02491 447 MobiDBLite consensus disorder prediction 127 145 - -
Pumo5g02491 447 Gene3D - 206 311 - -
Pumo5g02491 447 SMART cyclin_7 323 405 IPR013763 -
Pumo5g02491 447 SMART cyclin_7 226 310 IPR013763 -
Pumo5g02491 447 SUPERFAMILY Cyclin-like 181 314 IPR036915 -
Pumo5g02491 447 PANTHER CYCLINS 144 424 IPR039361 -
Pumo5g02491 447 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02491 Pumo-Chr5 68912484 68919730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02491 1 440 Core Cell Cycle Gene Families AT4G37490 49.670 2.14e-135 394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02491 5 68912484 68919730 Pumo5g02491 5 68912484 68919730 ECH
Pumo9g00314 9 5021376 5024893 Pumo5g02491 5 68912484 68919730 PCT