Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04390 ATGGATAAAGTAGGGTGGAGTTTGAAGAGCTTCAGAACTTTGTTGGTTGTGGGTTCCATAACCTTCCCTATTATAGTCACGTTTACTCTCATACACCAAAACTCGGTTTTTGATCTCGTCCAAGGATTTAACGTATTGACCGGAAGAACCCAGAATACTACTACTACTACTAATGTCTCAAAACAAGCTACAGTTCAAGCTAGGGGAGAAAGAGACACGAATATTATTAGAGAGTCAGCTGTAGATAAGGTGCTGGGAGACAAAAATCAAAATCCTACACCTGGGATCTTAGAAGAACAAGCCCAGACACAACCTCTCTCAAATATTGGTCCAAAGAATCATTCATTTGAAGATGGGAAGAATGTTCTATCCCTATCTACTACTACCATTGCTAATGACAAACTCCTTGATGGACTTCTAGTTTCCTCATTTGATGAAGCATCATGCTTAAGTAGATATCAATCTTACTTGTACCGCAAAGCTTCCCCTCATAAACCTTCTAAATATCTGATATCTAAGCTACGAAACTATGAACATCTTCATCAAAGATGTGGACCCTCTACCAAATCCTACAACAAAATCATGAGAAAGGGCACAAAATTTAGCAAAAATGATGCTAGTACAAAGTGCAAATATCTTGTCTGGACAGCTTCCAATGGCTTAGGGAACAGGATAGTAACCTTGGTTGCAGCATTTCTTTATGCTATCCTTACAGACCGTGTTCTACTTGTCAAATTTGGGACCGATATGTTTGGCCTCTTTTGTGAGCCGTTTCCTGATTCCTCATGGTTATTGCCCAGGAATTTTCCCTATTGGAAAGATCAGAAACATATTGAAACATATGAAAGCATGTTGAAGAATAACAAGGCAAACAGTTCACATGAGCTTTTGCCACCATTTCTTATTCTTAATCTACAGCACACCCATGATGGTCACAACAATTTTTTTCATTGTGATCGAAGTCAAGATCTTCTCCAGAAAATTCCTGTGCTGATTTTATGGTCAGATCAATATTTTGTCCCTTCTCTTTTTATGATTCCATCATTTAGACAAGATCTAAGTAAAATGTTCCCTGAGAAAGACACTGTTTTTCACCATCTGGGACGTTACCTTCTTCACCCATCAAATGAGGCATGGGAAATAATTAGAAAATTCTATGAGGCACACCTAGCCAAGGCAAATGAGCGGATTGGCCTTCAGATTAGAGTATTTAATACTCACCGAGCACCACATCAAACCATTATCAATGAAATTATTGCCTGCACCCTTCAGCATAAGTTGCTGCCTGATTTTGACATGCGAAAGTCAGCAACTTCTCCTTTGAAGAAGACTTCAAAAGCTGTTCTAGTAGCATCTTTATACTCAGAATATGGTGAGAAGCTGCGGACTATGTATCAGGCAAATACAACTGTGACCAGGGAAGTAATAAGAGTTTATCAGCCAAGTCATGAAGGGCGTCAAAAGTCAAATGATGACATGCACAACATTAAGGCATGGACTGAAATATATTTGCTGAGTTTGTGTGATGCATTGGTTACAAGCCCCAAGTCTACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTTTGAAGCCATGGATTTTGCAGAGGGCATATGGGGAAACCATCCCAGATCCACCTTGTCGTCAAGCCAAGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGACTGTAGGGCCAATAGCACAGTTGATTTTACTTCCCTTTTTCATCATATGAAGCATTGTGAAGATGTATCTAGTGGATTGAGGCTGGTTAATGCTAATCACTAG 1794 0.3969 MDKVGWSLKSFRTLLVVGSITFPIIVTFTLIHQNSVFDLVQGFNVLTGRTQNTTTTTNVSKQATVQARGERDTNIIRESAVDKVLGDKNQNPTPGILEEQAQTQPLSNIGPKNHSFEDGKNVLSLSTTTIANDKLLDGLLVSSFDEASCLSRYQSYLYRKASPHKPSKYLISKLRNYEHLHQRCGPSTKSYNKIMRKGTKFSKNDASTKCKYLVWTASNGLGNRIVTLVAAFLYAILTDRVLLVKFGTDMFGLFCEPFPDSSWLLPRNFPYWKDQKHIETYESMLKNNKANSSHELLPPFLILNLQHTHDGHNNFFHCDRSQDLLQKIPVLILWSDQYFVPSLFMIPSFRQDLSKMFPEKDTVFHHLGRYLLHPSNEAWEIIRKFYEAHLAKANERIGLQIRVFNTHRAPHQTIINEIIACTLQHKLLPDFDMRKSATSPLKKTSKAVLVASLYSEYGEKLRTMYQANTTVTREVIRVYQPSHEGRQKSNDDMHNIKAWTEIYLLSLCDALVTSPKSTFGYVAHSLGGLKPWILQRAYGETIPDPPCRQAKSMEPCFHYPPKYDCRANSTVDFTSLFHHMKHCEDVSSGLRLVNANH 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04390 597 FunFam Galactoside 2-alpha-L-fucosyltransferase 208 259 - -
Pumo4g04390 597 Pfam Xyloglucan fucosyltransferase 131 566 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pumo4g04390 597 Gene3D - 207 261 - -
Pumo4g04390 597 Gene3D - 379 533 - -
Pumo4g04390 597 FunFam Galactoside 2-alpha-L-fucosyltransferase 380 533 - -
Pumo4g04390 597 PANTHER FUCOSYLTRANSFERASE 2-RELATED 37 594 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04390 Pumo-Chr4 84940426 84944075 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04390 126 593 Xyloglucan Fucosyltransferase1 AT2G03220 51.899 8.29e-171 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04390 K13681 - gmx:100799776 1026.54