Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04388 ATGGATAGAGCAGGGTGGAGTTTCAGGAGCTTCAAAACATTATTGCTTGTGACTTCCATAACATTCCCTATTTTAGTCACATTTACTGTCACATACAAAAACTCAATTTTTGATCTCGTCCAAGGATTTAATGTATCGGCCGAAAAAACCAAGAACACTACTACTAATGTCCTAAAACAAGGGGCCCAGAACTCATTCAATGAGTCAATTGTAGGTCCAAAAAATAATTCATTTGAAGATGGGAAGAATGTGTTATCCCTATCTACTACTACCATTGCTAATGACAAACTCTTTGATGGACTCCTAACTTCCTCATTTGATGAAGCATCATGCTTAAGTAGATATCAATCTTACTTGTACCGCAAAGCTTCCCCTTATAAACCTTCTAAATATTTGATATCCAAGCTACGGAACTATGAACATCTTCATCGAAATTGTGGACCTTCGACCAAATCCTACAACAAAGTCATGAGAAATGGCTCCAAATTTAGCAAAAATGATGCTAGTACAAAATGCAAATATCTTGTTTGGACAAGTGCCAATGGCTTAGGGAATAGGATGATAACCTTGGTTGCTGCATTTCTTTATGCTATCCTCACAGACCGTGTTCTACTTGTCAGATTTGGGGCTGATATGTTTGGTCTCTTTTGCGAGCCGTTTCCTTATTCCTCATGGTTATTGCCTAAGAACTCTCCTTGTTGGAAGGATCTGAAACATTTTGAAACGCATGAAAGCATGTTAATGAATAACAAGGCAAACAATTCGCAGGAGCTTTTGCCACCATTTCTTGTTCTTAATCTAACACATACCCATGTTGGCCATACTAATCTTTTTCATTGTGATCCAAGTCAGGATCTTCTCCAGAAAATTCCCGTGCTGATTTTATGGTCGAATCAATATTTTGTCCCCTCTCTTTTTATGATTTCCTCATTTAGACAAGAACTAAACAAAATATTCCCTGAGAAAGACACTGTTTTTCACCACCTGGGACGTTACCTTTTTCACCCATCAAATGAGGCATGGGAACGAATTCGAAAATCCTATGAGGCACACCTAGCAAAGGCAAATGAGAGGATTGGCCTACAGATTAGAGTATTGAATACTCATCAACCACCACACCAAACCATTATCAATGAAATTATAGCCTGCAGCCTTCAGCATAAGTTGTTGCCTGAATTCGACATGCAAGACTTAGTAACTTCTCCTTTGAAGAAACAGACATCAAAAGCTGTTATAGTAGCATCTTTATACTCAGAATATGGTGAAAAGCTGAGGACTATGTATCAGGCAAATACAACTATGACCAGGGAAGTAATAAGAGTTTATCAGCCAAGTCATGAAGAGCATCAAAAGTCTAATGATGACATGCACAACATTAAGGCATGGACTGAAGTATATTTGCTGAGTTTATGTGATGCATTGGTTACAAGCCCCAGGTCTACTTTTGGGTATGTTGCTCAGAGTCTTGGAGGTTTGAAGCCATGGATTTTGCAGGGGGTATATGGCAAAACCATCCCAGATCCACCTTGTCGACGAGCCAAGTACATGGAACCTTGTTACCAATATCCTCCTAAGTATGACTGTAGGGCAAATAGCACAGTTGATTTTCCTTCCATTTTTCATCATATCAAGCATTGTGAAGATATATCTAGTGGATTGAGGGTGGTAAATGCTTATCACTAG 1683 0.3886 MDRAGWSFRSFKTLLLVTSITFPILVTFTVTYKNSIFDLVQGFNVSAEKTKNTTTNVLKQGAQNSFNESIVGPKNNSFEDGKNVLSLSTTTIANDKLFDGLLTSSFDEASCLSRYQSYLYRKASPYKPSKYLISKLRNYEHLHRNCGPSTKSYNKVMRNGSKFSKNDASTKCKYLVWTSANGLGNRMITLVAAFLYAILTDRVLLVRFGADMFGLFCEPFPYSSWLLPKNSPCWKDLKHFETHESMLMNNKANNSQELLPPFLVLNLTHTHVGHTNLFHCDPSQDLLQKIPVLILWSNQYFVPSLFMISSFRQELNKIFPEKDTVFHHLGRYLFHPSNEAWERIRKSYEAHLAKANERIGLQIRVLNTHQPPHQTIINEIIACSLQHKLLPEFDMQDLVTSPLKKQTSKAVIVASLYSEYGEKLRTMYQANTTMTREVIRVYQPSHEEHQKSNDDMHNIKAWTEVYLLSLCDALVTSPRSTFGYVAQSLGGLKPWILQGVYGKTIPDPPCRRAKYMEPCYQYPPKYDCRANSTVDFPSIFHHIKHCEDISSGLRVVNAYH 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04388 560 Gene3D - 339 493 - -
Pumo4g04388 560 Pfam Xyloglucan fucosyltransferase 93 529 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pumo4g04388 560 Gene3D - 169 218 - -
Pumo4g04388 560 Coils Coil 338 358 - -
Pumo4g04388 560 FunFam Galactoside 2-alpha-L-fucosyltransferase 170 221 - -
Pumo4g04388 560 FunFam Galactoside 2-alpha-L-fucosyltransferase 342 496 - -
Pumo4g04388 560 PANTHER FUCOSYLTRANSFERASE 2-RELATED 24 557 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04388 Pumo-Chr4 84932247 84934477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04388 88 556 Xyloglucan Fucosyltransferase1 AT2G03220 49.894 1.01e-162 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04388 K13681 - gmx:100814715 970.304