Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04241 ATGATCCGCATATTATTAAGAATAACATTGTTGTGTGGTCTTGTCTCCACATCAACGGCTATTAGTTTCAAGTGCCGGGAAAGAAGCAAGTGTGGAGCGTTGGTTGGTTACAGGTCGCGAGTTCCAACCACCTTAGGTGCCATCCAAAGCCTCTTCAACGTGACTCGCGTCGCAGACATTCTCGCCGCTAACGACCTCCCCGAGTGGACCCCACCCAACAGTTTCACGGTGAAGGAGAATCGGGTTATGCGGATCCCGTTTGAGTGCGACTGCACTGGGCCTGGGTCGTACGGCGAGCCCACTAAGCCCCCCGTGTACACGGTGCAGAGGGGCGATAACTTTTCTTATATAATAACGACGGTGTTCTCGGGTTTGGTGGGTTCAACGGATATCGAACGTGGGAACAACATGAGCAACTTGGAGAATTTAAAGACCGGACAGGAACTGCGAATGCCACTGCCATGCAGCTGTGGGGAGGTGAATGGGGTGAAAGTGGTGCACTTTGGATTGACGCTAGAATACGGAGTGACCTTGGAACAGTTATCTGATGAGTACCATGTGGACCCACACACCATGTTGGCTGTCAACCAAGCTGCCACTCCTGATCTTCTGCTCGGAAGGGCTTTGGATATTCCTCTCCCAGTTTGCTCCTCGATGGTGAGAAATGACTCGTTGGATTACCCTTTGCTTCTTCCAAATGGTTCTTATGTTCACACCGCAAATGGCTGTGTGAGATGCACCTGCGATGCTTCCAACAACTGGACATTATCATGCGAGCCATCCAAGCTTAAACCAACTAACTGGTCTACTTGCCCATCTATGAAATGCGACAATTCAAGTAACATGTACATTGGTAACACCACATATTCAAGTTCTCACAATCTTACAATCTGTGCCTATGCTGGTTATGGAACTCAAACTATCTTCACTACTCTTGCAACAGTGTCTATTCACCCCGGTTAG 963 0.4901 MIRILLRITLLCGLVSTSTAISFKCRERSKCGALVGYRSRVPTTLGAIQSLFNVTRVADILAANDLPEWTPPNSFTVKENRVMRIPFECDCTGPGSYGEPTKPPVYTVQRGDNFSYIITTVFSGLVGSTDIERGNNMSNLENLKTGQELRMPLPCSCGEVNGVKVVHFGLTLEYGVTLEQLSDEYHVDPHTMLAVNQAATPDLLLGRALDIPLPVCSSMVRNDSLDYPLLLPNGSYVHTANGCVRCTCDASNNWTLSCEPSKLKPTNWSTCPSMKCDNSSNMYIGNTTYSSSHNLTICAYAGYGTQTIFTTLATVSIHPG 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04241 320 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 177 317 - -
Pumo4g04241 320 ProSiteProfiles LysM domain profile. 104 151 IPR018392 -
Pumo4g04241 320 Gene3D LysM domain 101 161 IPR036779 -
Pumo4g04241 320 Pfam LysM domain 106 152 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04241 Pumo-Chr4 83350843 83353224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04241 1 311 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 40.000 2.33e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04241 - - gmx:100811504 472.241