Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04062 ATGTCAGCGATGAAGAGATTGAAGCAGAAGAATTGGAGCAGGCGGATGTGGAAGGATCGAATCAAACTCAAAAGGCTGAAGGAAAAACAGAAGCTAGCAGCGCAGCAAGCTGCAGAAAAGCAAAAGCCGAGGCATTCCACGGATCAAGCTCGGAGGAAGAAAATGTCCCGAGCACAAGATGGGATTCTTAAGTACATGCTGAAGCTCATGGAAGTCTGCAAAGCTCGCGGATTTGTGTATGGTATCATTCCTGAGAAGGGAAAGCCAGTTAGTGGTTCCTCTGATAACATTAGAGCTTGGTGGAAGGAGAAAGTAAAGTTTGATAAGAATGGCCCTGCAGCCATCTCTAAGTATGAAGCCGAGTGCCTTGCTATGAGTGAGGCTGATAATAGCCGAAATGGTAACTCTCAGAGCATTCTCCAAGACCTGCAAGATGCAACGCTTGGATCACTCTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCATTGGAAAAGGGTATACCTCCTCCTTGGTGGCCAAGTGGGAATGAAGATTGGTGGTCACAGTTGAATTTACCTCATGGTCAGAGTCCTCCTTATAAGAAGCCCCATGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTTACTGCTGTTATAAAGCACATGTCACCTAATATTGCAAAGATAAGGAGGCATGTTCGCCAGTCAAAATGCTTGCAGGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGGGGTATTAAGTCGAGAAGAAGCTCTCATTAGCCAGCCTAGTAGTGACAATGGTACATCTGGAATAACTGGAATGCCACCTGGTGTTCCTGTTGAGAATAAGCAAGCTGCTACTAGTAGTGCTAGCAACTATGATGTTGACGGTACTGATGATGGCATTGGTTCTGTTTCTTCTAAAGAAGATAGGAGAAATCAGTTTATGGACACCGAACCGTCAGATAACTTGTGCAGGGTTAGGAAATCTGTCCAAGATACAGATCAAGTTAAGAAGCAACCCAGGCCCAAAAAACCCCGAAAGCCCATTGACAAACCACCAGTGCAATCTGACAATGAAATTTTACATGTTGAGCCAAGAAGCAAAGGGCTCAATATGAACCAGACAGAAGCACAAGTGGTTGGAGTCCAGATTCATGGAAATGAACAGAGCAATGAGACAGATTCTGCTGCAAGGCCACTGGATAAAGGACATGAGGTGCCTGCACAACTACCAGCACCCGAGTTTGATCATTACTCTTATTTACATACAAACAACTTAATTTCATCAGAAAGCATGTATATGAGTGGAAGGCCAATACACTATCCTGAGTTGCAAAACCCTGACATGCATCATGAAACCACTTATAATCTTTATAATCCAGCAGCAGGATATGAGCCTGGTCAGGATAGACAGCAACAGGAACAATGA 1434 0.4414 MSAMKRLKQKNWSRRMWKDRIKLKRLKEKQKLAAQQAAEKQKPRHSTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAISKYEAECLAMSEADNSRNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPSGNEDWWSQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALISQPSSDNGTSGITGMPPGVPVENKQAATSSASNYDVDGTDDGIGSVSSKEDRRNQFMDTEPSDNLCRVRKSVQDTDQVKKQPRPKKPRKPIDKPPVQSDNEILHVEPRSKGLNMNQTEAQVVGVQIHGNEQSNETDSAARPLDKGHEVPAQLPAPEFDHYSYLHTNNLISSESMYMSGRPIHYPELQNPDMHHETTYNLYNPAAGYEPGQDRQQQEQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04062 477 MobiDBLite consensus disorder prediction 260 361 - -
Pumo4g04062 477 MobiDBLite consensus disorder prediction 41 56 - -
Pumo4g04062 477 FunFam Ethylene insensitive 3-like 1 44 122 - -
Pumo4g04062 477 Gene3D - 44 120 IPR023278 GO:0003700|GO:0005634
Pumo4g04062 477 Gene3D - 129 268 IPR023278 GO:0003700|GO:0005634
Pumo4g04062 477 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 12 464 IPR006957 GO:0003700|GO:0005634
Pumo4g04062 477 MobiDBLite consensus disorder prediction 28 56 - -
Pumo4g04062 477 SUPERFAMILY DNA-binding domain of EIN3-like 138 260 IPR023278 GO:0003700|GO:0005634
Pumo4g04062 477 Pfam Ethylene insensitive 3 12 257 IPR047091 GO:0003700
Pumo4g04062 477 FunFam Ethylene insensitive 3-like 1 131 267 - -
Pumo4g04062 477 MobiDBLite consensus disorder prediction 452 477 - -
Pumo4g04062 477 MobiDBLite consensus disorder prediction 304 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04062 Pumo-Chr4 81284021 81285454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04062 14 466 EIL Transcription Factor Family AT1G73730 58.388 1.38e-175 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pumo4g04062 EIN3 4.9e-125 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04062 4 81284021 81285454 Pumo4g04062 4 81284021 81285454 ECH