Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04024 ATGGCTAAGAAAGAGAGTATTTATTCATTAGGTGATTGGAGGAGAACACCAATTTGCACTTTCTTTAAGGATGCCAGACTAGTTTTTAAAGCAGACAGTCTTGGTCGGGAAATTTTGTCAATTGCATTGCCTGCAGCAATGGCTTTGACAGCTGATCCTATTGCTTCACTGGTTGACACAGCATTTATTGGCCAAATAGGTCCAATAGAGCTTGCTGCTGTAGGAGTTTCCATAGCTCTCTTCAATCAAGTATCAAGAATCGCAATATTCCCACTTGTCAGTGTGACAACCTCTTTTGTGGCTGAGGAAGATACCCTTAATGGAGCAAGCCCTCAGATAGAGGAGGGCAGATGCTTGGAAGCAGGTCCACCTACGGATGCTGAAACCAAAGAGTTATTACCACAGAAAGTTACAGGTGGAAATGATCACAATTCAGATTTTGTTGGCGAAAGTTTTAATGTAGTTAAGGAGGAACATAAGAGAAGGCATATCCCTTCAGCTTCATCAGCAATATTTATCGGTGGCATCCTTGGACTCATCCAGGCAATATTTCTTATATCTGCAGCAAAACCTTTATTGAACTTCATGGGAGTAACTTCTGACTCTCCTATGCTACACCCTGCAAACCAGTATCTGAAATTGAGGTCCCTTGGTGCTCCTGCTGTTCTTCTCTCATTAGCGATGCAGGGAGTCTTCCGAGGATTTAAAGACACTAGAACTCCTTTATATGCCACTGTGGCAGGAGATGTAACCAACATAGCACTAGATCCTTTATTCATGTTTGTATTCCGCTTGGGTGTCAGTGGTGCAGCCATCGCCCATGTTATATCTCAGTACCTAATTTCAGCTATTCTCCTGTGGAGGTTGTTGGAGCAAGTTGACCTTATACCTCCAAGCATAAAGCATCTTCAATTAGACCGATTTCTTAAAAATGGTTTTCTATTATTAATGAGAGTCATCGCTGTAACATTCTGTGTGACACTGGCTGCATCATTAGCTGCACGGCAGGGATCAACATCCATGGCTGCATTTCAAGTATGTCTGCAGGTTTGGTTGGCAGTGTCTCTTCTTGCGGATGGTCTGGCTGTTGCTGGGCAGGCGATTCTTGCAGGTGCATTTGCTAATAAGGACTTCGATAGGGCCACAGCAACTGCATCCCGAGTTCTGCAGATGGGTTTGGTTCTAGGATTGGCACTTGCATTCATTCTTGGAACAGGATTACACTTTGGTGCTAGACTATTTACAAGAGATGCTGATGTCCTCCACCTCATTCAAATTGGGATCCCGTTTGTTGCAGTCACTCAACCCCTGAATTCTTTAGCATTTGTATTTGATGGTGTCAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTCTCCATGGTTGTGGTGGCAATTCTTAGCATCATTTGTCTGCTTATTTTGTCATCCGCTGGTGGTTTCATTGGAATTTGGGTTGCTTTGACCATCTATATGGGCCTTAGGGCATTTGCTGGCTTCTTGAGAATTGGAACAGGATCGGGACCTTGGGAGTTCCTAAGGAGCTCATGA 1551 0.4378 MAKKESIYSLGDWRRTPICTFFKDARLVFKADSLGREILSIALPAAMALTADPIASLVDTAFIGQIGPIELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTLNGASPQIEEGRCLEAGPPTDAETKELLPQKVTGGNDHNSDFVGESFNVVKEEHKRRHIPSASSAIFIGGILGLIQAIFLISAAKPLLNFMGVTSDSPMLHPANQYLKLRSLGAPAVLLSLAMQGVFRGFKDTRTPLYATVAGDVTNIALDPLFMFVFRLGVSGAAIAHVISQYLISAILLWRLLEQVDLIPPSIKHLQLDRFLKNGFLLLMRVIAVTFCVTLAASLAARQGSTSMAAFQVCLQVWLAVSLLADGLAVAGQAILAGAFANKDFDRATATASRVLQMGLVLGLALAFILGTGLHFGARLFTRDADVLHLIQIGIPFVAVTQPLNSLAFVFDGVNFGASDFAYSAFSMVVVAILSIICLLILSSAGGFIGIWVALTIYMGLRAFAGFLRIGTGSGPWEFLRSS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04024 516 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 11 515 IPR044644 -
Pumo4g04024 516 NCBIfam MATE family efflux transporter 44 485 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo4g04024 516 Pfam MatE 166 258 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo4g04024 516 Pfam MatE 317 470 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo4g04024 516 CDD MATE_DinF_like 34 505 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04024 Pumo-Chr4 80900218 80905864 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04024 4 80900218 80905864 Pumo10g02635 10 48823793 48829692 ECH
Pumo4g04024 4 80900218 80905864 Pumo4g04024 4 80900218 80905864 ECH
Pumo4g04024 4 80900218 80905864 Pumo11g01639 11 47715132 47719052 PCT