Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03056 ATGGATATAATGGAAGTTTCAATCTTGCATCATGTGGGGATTGTGCTTATTGGGCTATGGATTCTCTCTGCATTCGATTGGTGTCACACGGTTGTTTATTTTGTTGCTTTGATCTATCTTTTTCTGGTTCATGAGCGTTATGTTACGAGGCTGCGGAGGAAGTTGCAGTTTGAGGAGTGGAAGCAAGCTAATCAAAGAAGGGTGCTTTCAGATTCTGAAACAGTCCGGTGGTTGAACCATGCAGTTGAAAACATATGGCCCATATGCTTGGAACAGATTGCCTCTCAGAAGATATTATTCCCTATCATACCGTGGTTCTTAGAGAAGTACAAACCTTGGACTGCTAAAGAAGCTGTTGTTCAGCACCTATACCTGGGAAGAAACCCACCTCTGATTACTGAAATTAGGGTTCTTCGCCAGAGTGATGATGACCACTTGGTTCTGGAGTTAGGATTGAATTTTCTCACGGCTGATGATATGAGTGCAATACTTGCTGTGAAACTAAGAAAACGATTGGGCTTTGGAATGTGGGCAAAACTGCACATTACGGGAATGCATGTTGAAGGGAAGGTCCTAGTTGGGGTAAAGTTTCTCCCGACATGGCCTTTTATTGGCCGTTTGCGTGTATGCTTCGTTGAACCTCCATATTTTCAGATGACTGTCAAACCTATGTTTACTCATGGGCTTGATGTGACTGAACTTCCAGGCATTGCTGGGTGGCTAGATAAGCTGCTGTCTATTGCTTTTGAACAGACCCTTGTTGAGCCCAATATGCTGGTTGTTGATGTTGAGAAATTCGTTTCACCACAGCCAGAGTCTTGGTTCAAAGTGGATGAGAAGGAACCGGTTTCTTATGCAAAAGTAGAAGTTATTGAAGCATCTGACATGAAGCCATCAGATCTAAATGGATTAGCGGATCCTTATGTGAAAGGTCAAATGGGTGTATACAGATTCAGGACAAAGATACAAAGGAAAACACTTACTCCAAAATGGCATGAGGAATTTAAAATTCCCATCATAACATGGGAGTCTGACAATGTGCTGGTTATTGCAGTTCGTGACAAGGATCATTTCTATGATGATATCCTTGGGGACTGTTCTGTGAACATCAATGAATTTAGGGATGGGCAAAGACATGATATGTGGCTGTCACTTAAGAACATGAAAATGGGGAGGTTGCGTTTGGCAATAACTATTCTTGAAAATAATGGAAAGGGAGTTGATACTACATGTGACCAGGAAACAATGGACTTTGAAGAACGAAAAGACTCCTTTGAAGCAAATGAGACTACTGACAATAGTTCCTTCTCATCTATTCCACCTGAAAAATCTGAGAAGTTGGCAGATAACTATGAGCCTATAGACATCAAAGGGCAAAAGGAGACAGGAATTTGGGTTCATCAGCCAGGAAGTGAAGTTTCCCAAAGGTGGGAGCCTAGGAAAGGGAAGAGTCGGAGCCTTGATACAGAAATTCATGGGGAGCCTAATGATTCAGTTGGCAGTGGCAATTCTGGATCCTTGAACAATGACAGCAGCAGTCCTGATAATAATCCCAAAGAAAAGCATCGAATGAGATCGGTTAGGAGGGGCCTGCACAAGATTGCTTCAGTATTCCACCGGAGTAAAATAAGGGAGGATCCGTCAGGTCCTGTTGGAGAGGACTTTCCATCTCCACATGATAACATCAGGTCAGAGAATGCTAAGGGGATGGTTGGTGTGCATTTTGTTGTGGATGAGAACATTTCTGGCTTTCAAATTGGAAAGGTTCAGGCTGAAGGGGGATCAACTGAAGGGAGTGGTCCTGATAGCCCTGGCAGTGCCAAGGGAAATGTCAAGGATATGGCAAAGAATATTTTGAAACATGCAGAAAAATCGGCTCGTGGCTTGAGGCACGTTCTTTCTTCTAAATCAAGGAAATATAAACATGAGTCTCCAACAGTTCCAGAAAGAGAACATGAATCTGACTCTTCTGATGAGGAATCTATTGCAGCTCAGTCTCCCAGAGATACTCCAGTTGGTTCTCATGCTGTGGTCTCAGGCAGCAATGGTTCCCCCAATTCCGGGGTGAATGTGGTTCAAACAGTTCCATCTAACACTAATGTGGACAATGAAGCCCCAGTGAAGATCACAAATGTAAAAGATGACCCTGAAAATGCATGCCCCCCTGACAGGTCTAGCGAAGAATTTGTTAAATCTGCTGAACTGGAGCATGATAAAGAGGAAATGGGGGCAGATAAAAGAGAATTGTCCCATTGA 2256 0.4317 MDIMEVSILHHVGIVLIGLWILSAFDWCHTVVYFVALIYLFLVHERYVTRLRRKLQFEEWKQANQRRVLSDSETVRWLNHAVENIWPICLEQIASQKILFPIIPWFLEKYKPWTAKEAVVQHLYLGRNPPLITEIRVLRQSDDDHLVLELGLNFLTADDMSAILAVKLRKRLGFGMWAKLHITGMHVEGKVLVGVKFLPTWPFIGRLRVCFVEPPYFQMTVKPMFTHGLDVTELPGIAGWLDKLLSIAFEQTLVEPNMLVVDVEKFVSPQPESWFKVDEKEPVSYAKVEVIEASDMKPSDLNGLADPYVKGQMGVYRFRTKIQRKTLTPKWHEEFKIPIITWESDNVLVIAVRDKDHFYDDILGDCSVNINEFRDGQRHDMWLSLKNMKMGRLRLAITILENNGKGVDTTCDQETMDFEERKDSFEANETTDNSSFSSIPPEKSEKLADNYEPIDIKGQKETGIWVHQPGSEVSQRWEPRKGKSRSLDTEIHGEPNDSVGSGNSGSLNNDSSSPDNNPKEKHRMRSVRRGLHKIASVFHRSKIREDPSGPVGEDFPSPHDNIRSENAKGMVGVHFVVDENISGFQIGKVQAEGGSTEGSGPDSPGSAKGNVKDMAKNILKHAEKSARGLRHVLSSKSRKYKHESPTVPEREHESDSSDEESIAAQSPRDTPVGSHAVVSGSNGSPNSGVNVVQTVPSNTNVDNEAPVKITNVKDDPENACPPDRSSEEFVKSAELEHDKEEMGADKRELSH 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03056 751 MobiDBLite consensus disorder prediction 474 492 - -
Pumo4g03056 751 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 281 400 IPR035892 -
Pumo4g03056 751 MobiDBLite consensus disorder prediction 422 529 - -
Pumo4g03056 751 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Pumo4g03056 751 CDD C2 287 385 - -
Pumo4g03056 751 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 698 - -
Pumo4g03056 751 MobiDBLite consensus disorder prediction 587 751 - -
Pumo4g03056 751 MobiDBLite consensus disorder prediction 638 659 - -
Pumo4g03056 751 MobiDBLite consensus disorder prediction 614 630 - -
Pumo4g03056 751 Gene3D C2 domain 270 401 IPR035892 -
Pumo4g03056 751 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
Pumo4g03056 751 MobiDBLite consensus disorder prediction 675 706 - -
Pumo4g03056 751 SMART C2_3c 285 382 IPR000008 -
Pumo4g03056 751 CDD SMP_SF 95 262 - -
Pumo4g03056 751 MobiDBLite consensus disorder prediction 496 514 - -
Pumo4g03056 751 MobiDBLite consensus disorder prediction 717 751 - -
Pumo4g03056 751 Pfam C2 domain 287 385 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03056 Pumo-Chr4 59499758 59505790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03056 278 397 Lipid Metabolism Gene Families AT3G61300 30.400 6.15e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03056 4 59499758 59505790 Pumo4g03056 4 59499758 59505790 ECH