Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03054 ATGTCAGAGATTGTGCCTGCAGAACCCATTGGTGGCATCTATTTCGAGCGAGGAGAGACATCAACAGCATCAGCATCAGCATCAGAGGCACCCCATGTCACGTTGGCCATTACCAATGGCAGCAATAACGTTGAATATGTTCCAGAACCCTTTGACAGTGAAAGGTTGCCAACAGTTTTTGCTTCTGAAATCCAAAGGTTCCTTCGAGTGGCCAACTTGCTTGGAAAGGAGGAGCCTCGTGTTGCTTATCTTTGCCGTGTTCATGCCTTTGTGATTGCACACTACTTGGACAAAAATTCTAGTGGAAGGGGTGTTAGACAATTCAAAACTTCACTACTTCATCGACTTGAACAGGATGAGCATGTTACAAAAAAGAAGGGAACAAGTGACATTCGTGAACTTAAAAATGTTTACCGTGCCTACAGGGATTATTATATCAGACACGATAAAGCGTTCGATCTAGAACAAAGTCGAAGAGAGAGATTGATAAATGCACGAGATATTGCTACTGTTCTGTTTGAGGTGCTAAAGACAGTTACAGATCCAGCTAGTTCTCAGGCACTCATCCAAGGAAATGCAATCCATAAAAAATCTGAATTTAACATTCTTCCACTTGAGCAAGGAGGCATTCAGCATGCAATTATGCAGCTGCCTGAGATTAAAGCTGCCATTGCAGTTATTCGCAATGTCCGTGGTTTACCCCCGGCCCAAGATTTCAAGAAGCAAGGAGCCTTTGTGGATCTATTTGATTTTCTTCAGCATTGTTTTGGATTCCAGGAAGCCAATGTGGCCAACCAAAGGGAACATCTAATTCTACTCCTAGCCAACATGCAGACTCGTCAAACTCACAACCAGACATCTGTTTTGAAGTTAGGGGAAGCAGGTGTGGATGAACTGATGAGAAAGTTTTTCAAAAACTATACAAACTGGTGCAAATTTTTGGAAAGGAAAAGCAATATCCGTTTACCTTTCGTGAAACAGGAAGCCCAACAGTATAAAATTTTATACATTGGGCTTTACCTACTCATATGGGGGGAAGCAGCTAATTTGCGGTTCATGCCAGAATGTCTCTGCTATATTTTTCATCATATGGCATATGAATTGCATGGAATTTTAAGTGGTGCTATCAGCTTAACAACATGGGAAAAGGTCATGCCCGCATATGGAGGAGAACCGGAGTCATTCCTTAAGAATGTCGTCACCCCAATATACAATGTTATACAAAAGGAAGTTGCCAATAACAAAGGAGGGGCAGCTGATCATTCTGTATGGAGAAACTATGATGATCTGAATGAGTATTTCTGGTCTCCTGATTGTTTCAAAATCGGTTGGCCCATGCGTCTGGACCATGACTTTTTCTTTGTAAAATCTAAAAATGAATCAAAACCAGATGTCAAGAACAAGAATGCTCTTGCTGTGTCACCTGGTAAAACAAAACAAAAGAAGAATATAGAAAAGAGCGATGAAGAAGACCCAGAGGATGCAGCAGGGGAGGAAACTCATGAACCACAATGGCTGGGAAAGACAAATTTTGTAGAGATTCGTTCATTCTGGCAAATTTTTAGAAGCTTTGATAGAATGTGGAGCTTTTTTATTCTATCCCTTCAGGCAATAATAATCATTGCTTGTCATGACTTGGGATCTCCACTACAGTTGTTTGATGCCGTAGTATTTGAGGACTTAATTAGCATCTTCATTACCTCTGCAATTCTTAAACTTATTCAAGCAATTTTAGACATTGCTTTTATGTGGAAAGCAAGATATACCATGGAATATTCTCAAAAGGTGAAACTTATGATGAAGCTGGTCTTAGCTACTATATGGACTATTGTTCTTCCTGTATGCTATGCTAATTCGAGAAGAAAATATACTTGTTATTCCACAAAGTATGGAAGCTTGGTTGAGGAATGGTGCTTTACTTCCTATATGGTTGCAGCAGCAATATACCTGACAACTAATGCAGTTGAAGTTGTGTTATTTTTTGTCCCTGCTGTTGCCAAGTATATTGAGGTCTCTAATTACCAGATATTCAGAGTTTTGTCTTGGTGGATTCAGCCTAGAATCTATGTTGGTCGGGGGATGCAAGAAGACCAGGTTTCAGTTTTAAAGTACACATTGTTTTGGATAATGGTGTTATCATGTAAATTTCTGTTTAGCTACAGTTTTGAGATAAAACCACTCATAGCACCTACCAGACAGATTATGAAAATGGGTGTAAAGAAGTATGAATGGCATGAGCTTTTTCCAAAAGTCAAAAATAATGCTGGTGCAATTGTGGCTGTATGGAGCCCTGTAGTAATTGTGTATTTTATGGACACACAAATTTGGTATTCTGTTGTCTGTACAATAATTGGTGGACTTTATGGCATTTTGCATCACCTTGGTGAGATAAGGACACTTGGAATGCTGAGAAGTAGATTTGACTCCTTACCTTCAGCATTTAATGTCTGTCTGATCCCACCATCTTCCAAACGTGGTAAAAAAAAAAGAAAAGGCCTCCTCAGCAATATATTTCAAAAGTTGCCAGATGAAAAAAATGCCACTGCCAAATTTGTTGTAGTATGGAATCAAATTGTAAATCATCTTCGTCTTGAAGACTTGATTAGTAACAGAGAGATGGATTTGATGATGATGCCTGTGTCTTCAGAATTGTTTTCTGCCAAGGTTCGTTGGCCTGTTTTCCTCTTGGCAAATAAGTTTTCTACAGCTTTGACCATTGCTAAAGATTTTGAGGGAAAGGAAGAGATTCTTGTCAAGAAAATTAGAAAAGACAAATACATGTTTTATGCTGTAAGAGAGAGTTACCAGTCGCTAAAATATGTGCTTGAAATTCTTGTTGTGGGTAGCACAGAGAAAAGGATCATATGTGATATACTAAGCGAAATTGAAAAGAATATCCAAGAAACAACTCTTCTAAAGAACTTTAACATGAAAGTTCTCCCAGCTCTACATGCTAAGGTCGTTGAGCTAGCTGAACTTCTGATGGAGGGAGATAAAGAACATCAGCACAAAGTTGTGAAAGCCTTGCTAGATATGTTTGAATTGGTAACAAATGATATGATGGTTGATTCCAGAATATTGGATATGTTCCACTTTCCGGAACAAAATGAGTGTGGCTTTGTCTATTTTAGAAATGATGATCAGCTATTTGACAGAGTGGAAATGAATAGAGATTTCTATCCATTTGCCAATGAGAATTCTATCCATTTTCCATTGCCAGATAGTGGTCCTCTGATGGAAAAGATCAAGCGTTTTCATTTGTTGCTTACAGTCAAAGATACAGCAATGGATGTGCCTGCAAACTTAGATGCCCGTAGGCGCATATCATTCTTTGCTACTTCTCTGTTTACAGATATGCCTGATGCTCCAAAAGTGAACAATATGATGCCATTCTGTGTTATAACTCCACATTACATCGAGGACATCAATTTTTCGCTTAAGGAGCTTGGTTCAGATAAAGAGGAGGACTCTATCATCTTCTACATGCAAAAGATATATCCAGATGAATGGACAAATTTTTTGGAACGCATGGGCTGTGAACACCGTAAGAGTCTAGAAGATGAAAACAAGATAGAAGATCTTAGACTGTGGGCTTCATTCCGGGGCCAAACACTAAGCAGAACAGTTAGAGGGATGATGTACTACAGAGAAGCCTTAAAATTACAAGCATTTCTTGACGTGGCTGAAGAAGAAGATATTCTTGAGGGTTATGAGACTGCTGAAAGAGGTAACAGGGCATTGTTTGCTCATCTAGAAGCACTAGCAGACATGAAATACACCTATGTCATTTCCTGTCAATCACTTGCATCACAAAAGCTTTCGAAAGATCCTCGTTATCAAGATATGATTGACTTGATGACAAGGTATCCATCTCTTCGTGTTGCTTATGTTGAGGAAAAAGAGGAGATTGGTAAAACTCACAAAGTATATTCATCTAAACTGGTTAAAGTTGTCAATGGTTTAGAACAGACAATATATCAAATAAAACTACCAGGTCCACCTTATCTTGGAGAAGGGAAGCCTGAAAACCAAAACAATGCAATAATATTCACTCGTGGTGAAGCACTCCAAACAATTGATATGAACCAAGATAATTACTTGGAAGAAGCTCTTAAAATGAGAAACCTTCTCCAAGAATTTCTTCGGCGCCAAGGAAGGCGTCATCCTACAATACTTGGTTTAAGGGAACACATTTTCACAGAAAGTGTGTCTTCTCTGGCATGGTTCATGTCATATCAAGAGACCAGCTTTGTCACTATTGGTCAAAGGCTTCTGGCTAATCCTCTCAGGGTACGGTTCCACTATGGCCATCCAGATGTATTTGATAGGGTTTTTCATATCACAAGAGGAGGAATTAGCAAAGCATCTAAAACAATTAACTTGAGTGAGGATGTTTTTGCTGGATTTAATTCAACTTTAAGACGGGGATGTATTTCCTACCATGAATACTTACAAATTGGCAAAGGTCGTGATGTAGCTCTAAACCAGATCTCAAAATTTGAAGCCAAGGTAGCAAATGGAAACTGTGAGCAAACTATAAGCCGTGACATATTCCGCCTTGGGCGGCAATTTGATTTTTTCCGGATGCTATCATGCTATTTCACTACAATTGGATTTTACTTCAGCAGCTTGCTTTCAGTGTTAGGAATCTATGTATTTCTCTACGGGCAGCTATACCTGGTGCTTAGTGGGTTGGAAAGAGCACTTGTCATTGAGGCTCGAATCAAGAATGTGCAGTCCTTAGAAACAGCTCTTGCCTCCCAGTCATTCATACAACTTGGACTTCTGACAGGCTTGCCAATGGTGATGGAAATAGGACTTGAGAGAGGTTTCTTCACTGCCCTAAAGGACTTTGTCCTCATGCAATTGCAGTTGGCCGCTGTTTTCTTCACTTTCGCCCTTGGAACGAAAACACATTACTATGGCCGAACGCTTTTGCATGGGGGAGCAAAGTACAGACCAACAGGACGGAAAGTTGTCTTCCATGCTAGCTTCACTGAGAATTACAGATTGTATTCAAGAAGCCACTTTGTTAAGGCATTTGAGCTAATGCTGCTGTTGATTGTTTATAACATGTTCAGGAGGTCCTATCAAAGTAACATGGCATATGTGTTGATAACATATGCCATTTGGTTCATGTCATTGACTTGGTTGTGTGCACCTTTTCTTTTTAACCCTGCCGGGTTCAGTTGGACCAAGACAGTAGATGACTGGAAAGAGTGGAATAAATGGATCAGGCAACAGGGTGGTATAGGAATTCAACAAGATAAAAGTTGGCATTCTTGGTGGAATGATGAACAAGCTCATCTTCGCTGGTCAGGTCTTGGTTCTAGGTTGACTGAAGTAATGCTTTCTCTCCGTTTTTTCATCTATCAGTATGGTTTGGTCTATCACCTAGACATCTCTCAGCATAGCAAAAATTTTCTGGTTTATGTCCTTTCATGGATTGTGATTGTTGCAATTTTCCTCTTGGTGAAGGCTGTTAACATGGGAAGGCAACTACTCAGTGCTAATTATCAGCTTGGATTCAGATTTTTCAAAGCATTCTTGTTCCTGGCTGTTCTTGCCATCATCTTTACTCTTTCTATTATATGTGAATTGTCACTGATGGACATTTTCGTTTGCTCTCTAGCATTCATGCCAACCGCATGGGGATTGATACTGATTGCACAAGCTGCAAGGCCAAAGATAGAGCACACAGGGTTGTGGGAGTTCACACGTGCACTTGCTAGAGAATTTGATTATGGAATGGGGATAGTTCTTTTTGGACCTATTGCTATTTTGGCATGGTTACCAATCATTAAAGCCTTCCATGCTCGTTTTCTTTTCAATGAGGCATTCAAAAGGCACTTGCAAATCCAACCATTTTTATCAGGAAAAAAGAAGAAGCACAGGACTTGA 5901 0.3967 MSEIVPAEPIGGIYFERGETSTASASASEAPHVTLAITNGSNNVEYVPEPFDSERLPTVFASEIQRFLRVANLLGKEEPRVAYLCRVHAFVIAHYLDKNSSGRGVRQFKTSLLHRLEQDEHVTKKKGTSDIRELKNVYRAYRDYYIRHDKAFDLEQSRRERLINARDIATVLFEVLKTVTDPASSQALIQGNAIHKKSEFNILPLEQGGIQHAIMQLPEIKAAIAVIRNVRGLPPAQDFKKQGAFVDLFDFLQHCFGFQEANVANQREHLILLLANMQTRQTHNQTSVLKLGEAGVDELMRKFFKNYTNWCKFLERKSNIRLPFVKQEAQQYKILYIGLYLLIWGEAANLRFMPECLCYIFHHMAYELHGILSGAISLTTWEKVMPAYGGEPESFLKNVVTPIYNVIQKEVANNKGGAADHSVWRNYDDLNEYFWSPDCFKIGWPMRLDHDFFFVKSKNESKPDVKNKNALAVSPGKTKQKKNIEKSDEEDPEDAAGEETHEPQWLGKTNFVEIRSFWQIFRSFDRMWSFFILSLQAIIIIACHDLGSPLQLFDAVVFEDLISIFITSAILKLIQAILDIAFMWKARYTMEYSQKVKLMMKLVLATIWTIVLPVCYANSRRKYTCYSTKYGSLVEEWCFTSYMVAAAIYLTTNAVEVVLFFVPAVAKYIEVSNYQIFRVLSWWIQPRIYVGRGMQEDQVSVLKYTLFWIMVLSCKFLFSYSFEIKPLIAPTRQIMKMGVKKYEWHELFPKVKNNAGAIVAVWSPVVIVYFMDTQIWYSVVCTIIGGLYGILHHLGEIRTLGMLRSRFDSLPSAFNVCLIPPSSKRGKKKRKGLLSNIFQKLPDEKNATAKFVVVWNQIVNHLRLEDLISNREMDLMMMPVSSELFSAKVRWPVFLLANKFSTALTIAKDFEGKEEILVKKIRKDKYMFYAVRESYQSLKYVLEILVVGSTEKRIICDILSEIEKNIQETTLLKNFNMKVLPALHAKVVELAELLMEGDKEHQHKVVKALLDMFELVTNDMMVDSRILDMFHFPEQNECGFVYFRNDDQLFDRVEMNRDFYPFANENSIHFPLPDSGPLMEKIKRFHLLLTVKDTAMDVPANLDARRRISFFATSLFTDMPDAPKVNNMMPFCVITPHYIEDINFSLKELGSDKEEDSIIFYMQKIYPDEWTNFLERMGCEHRKSLEDENKIEDLRLWASFRGQTLSRTVRGMMYYREALKLQAFLDVAEEEDILEGYETAERGNRALFAHLEALADMKYTYVISCQSLASQKLSKDPRYQDMIDLMTRYPSLRVAYVEEKEEIGKTHKVYSSKLVKVVNGLEQTIYQIKLPGPPYLGEGKPENQNNAIIFTRGEALQTIDMNQDNYLEEALKMRNLLQEFLRRQGRRHPTILGLREHIFTESVSSLAWFMSYQETSFVTIGQRLLANPLRVRFHYGHPDVFDRVFHITRGGISKASKTINLSEDVFAGFNSTLRRGCISYHEYLQIGKGRDVALNQISKFEAKVANGNCEQTISRDIFRLGRQFDFFRMLSCYFTTIGFYFSSLLSVLGIYVFLYGQLYLVLSGLERALVIEARIKNVQSLETALASQSFIQLGLLTGLPMVMEIGLERGFFTALKDFVLMQLQLAAVFFTFALGTKTHYYGRTLLHGGAKYRPTGRKVVFHASFTENYRLYSRSHFVKAFELMLLLIVYNMFRRSYQSNMAYVLITYAIWFMSLTWLCAPFLFNPAGFSWTKTVDDWKEWNKWIRQQGGIGIQQDKSWHSWWNDEQAHLRWSGLGSRLTEVMLSLRFFIYQYGLVYHLDISQHSKNFLVYVLSWIVIVAIFLLVKAVNMGRQLLSANYQLGFRFFKAFLFLAVLAIIFTLSIICELSLMDIFVCSLAFMPTAWGLILIAQAARPKIEHTGLWEFTRALAREFDYGMGIVLFGPIAILAWLPIIKAFHARFLFNEAFKRHLQIQPFLSGKKKKHRT 1966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03054 1966 Pfam Vta1 like 63 184 IPR039431 -
Pumo4g03054 1966 Pfam 1,3-beta-glucan synthase component 1098 1785 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Pumo4g03054 1966 Gene3D - 50 204 IPR023175 -
Pumo4g03054 1966 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 177 1959 - -
Pumo4g03054 1966 MobiDBLite consensus disorder prediction 465 501 - -
Pumo4g03054 1966 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 333 444 IPR026899 -
Pumo4g03054 1966 SMART FKS1_dom1_2 331 447 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03054 Pumo-Chr4 59473527 59490585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03054 3 1962 Glycosyltransferase AT3G14570 67.321 0.0 2747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03054 4 59473527 59490585 Pumo4g03054 4 59473527 59490585 ECH