Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02911 ATGGATAAATCAGAGCAGACTCAACAGCAGCAGCAGCAGCAACAACAGCATGTGATGGGAGTTGCTGCAGGTGCTAGCCAAATGGCCTATTCTTCTCACTACCCGACTGCTCCCATGGTGGCTTCTGGCACACCCGCTGTAGCTGTTCCTTCCCCAACTCAAGCTCCAGCTGCCTTCTCTGCTTCTGCTCACCAGCTTGCATACCAGCAAGCACAGCATTTCCACCATCAACAGCAGCAACACCAACAACAGCAGCTTCAAATGTTCTGGTCAAACCAAATGCAAGAAATTGAGCAAACAATTGACTTTAAAAACCATAGTCTCCCTCTTGCTCGGATAAAAAAGATAATGAAAGCTGATGAAGATGTCCGGATGATTTCAGCAGAAGCTCCGGTCATATTTGCAAAAGCATGTGAAATGTTCATATTAGAGTTGACGTTGCGATCTTGGATCCACACAGAAGAGAACAAGAGGAGAACTCTACAGAAGAATGATATAGCCGCTGCTATTTCAAGAAACGATGTTTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAGTTGAAAGAGGAAGGACTTGGAATAACCAAGGCTACTATTCCATTAGTGGGTTCTCCAGCTGATATGCCATATTACTATGTCCCTCCACAGCATCCTGTTGTAGGACCTCCTGGGATGATCATGGGAAAGCCCGTTGATCAACATCAAGCAGTGCTATATTCTCCACAGCAGCCTCGACCTCCCATGGCGTTCATGCCATGGCCCCATACACAACCCCAGCAACAGCAGCCACCCCAACAACAATCAGACTCATGA 816 0.4632 MDKSEQTQQQQQQQQQHVMGVAAGASQMAYSSHYPTAPMVASGTPAVAVPSPTQAPAAFSASAHQLAYQQAQHFHHQQQQHQQQQLQMFWSNQMQEIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGITKATIPLVGSPADMPYYYVPPQHPVVGPPGMIMGKPVDQHQAVLYSPQQPRPPMAFMPWPHTQPQQQQPPQQQSDS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02911 271 SUPERFAMILY Histone-fold 64 179 IPR009072 GO:0046982
Pumo4g02911 271 MobiDBLite consensus disorder prediction 1 20 - -
Pumo4g02911 271 MobiDBLite consensus disorder prediction 246 260 - -
Pumo4g02911 271 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 57 256 - -
Pumo4g02911 271 Pfam Core histone H2A/H2B/H3/H4 71 170 IPR007125 GO:0003677
Pumo4g02911 271 Gene3D Histone, subunit A 68 185 IPR009072 GO:0046982
Pumo4g02911 271 MobiDBLite consensus disorder prediction 242 271 - -
Pumo4g02911 271 FunFam Nuclear transcription factor Y subunit gamma 72 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02911 Pumo-Chr4 56195603 56196418 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pumo4g02911 CBFD_NFYB_HMF 2.3e-17 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02911 4 56195603 56196418 Pumo4g02911 4 56195603 56196418 ECH