Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01503 ATGTGGTACCCTTTCGAAATGGCTTCCTCTATGGCATCCATGTCTTCTTCTACCATCCTCCTCATAATCATCTGTACACTGTCCTCACTTCTGTCAGTTGCATCTGCAGCAACAGAAGAGGGACGGACAAGACCCTTCAAAAGTGTCTATGCCTTTGGGGACTCTTTCACGGACACTGGCAACACCAAAAATGCCGAAGGTCCAAGTGGCTTTGGCCATGTTTCAAACTCTCCCTACGGCACCACCTTCTTCAACCACTCCACCAACAGGTACTCAGATGGCAGGCTTGTCATTGATTTTGTGGCTGAAGCACTTTCACTGCCCTACTTGCCCCCCTACCGCCACAGCAAAGGCAATGACACTTTTGGTGTTAACTTTGCTGTTGCTGGTTCCACAGCCATAAACCATTTGTTCTTTGTCAAGCACAACCTCTCCCTTGACATCACTCCTCAGTCCATCCAAACCCAGATGATATGGTTCAACAGGTACCTAGAGACCCAGGAATGTCAAGAGTCAAATTGCAAGAATTTTGATGACACTCTATTTTGGTTTGGGGAGATTGGAGTCAATGACTATGCCTACACTCTTGGATCTACAGTCTCAGATGAAACCATAAGGAAGCTTGCAATCAGCAGTGTCTCAGGAGCTTTACAGACATTGCTTGAGAAGGGTGCCAAGTACCTAGTTGTGCAGGGTTTGCCTCTAACTGGGTGCTTGACATTGTCAATGTATCTGGCTCCTCCTGATGATAGGGATGACATTGGATGTGTGAAAAGTGTCAACAACCAAAGCTACTACCACAACCTTGTGCTGCAAGACAAATTACAGGAATTCAGGAAACAGTACCCCCAAGCTGTCATACTTTATGCTGATTACTATGATGCCTACCGCACTGTCATGAAGAATCCAAGCAAATATGGATTCAAAGAGACCTTCAACGTTTGCTGTGGATCAGGAGAACCACCTTTCAACTTCAGTGTGTTTGCCACATGTGGCACACCTAACGCCACTGTGTGCACAAACCCTTCTCAGTACATCAATTGGGATGGTGTTCACCTCACTGAGGCCATGTATAAAGTTATTTCTAGTATGTTTCTGCAAGGGAACTTCACCCAACCTCCGTTTAATTTTATGTTGGGAAAAAAAGAGAGGGTGGGGTGA 1161 0.4582 MWYPFEMASSMASMSSSTILLIIICTLSSLLSVASAATEEGRTRPFKSVYAFGDSFTDTGNTKNAEGPSGFGHVSNSPYGTTFFNHSTNRYSDGRLVIDFVAEALSLPYLPPYRHSKGNDTFGVNFAVAGSTAINHLFFVKHNLSLDITPQSIQTQMIWFNRYLETQECQESNCKNFDDTLFWFGEIGVNDYAYTLGSTVSDETIRKLAISSVSGALQTLLEKGAKYLVVQGLPLTGCLTLSMYLAPPDDRDDIGCVKSVNNQSYYHNLVLQDKLQEFRKQYPQAVILYADYYDAYRTVMKNPSKYGFKETFNVCCGSGEPPFNFSVFATCGTPNATVCTNPSQYINWDGVHLTEAMYKVISSMFLQGNFTQPPFNFMLGKKERVG 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01503 386 Pfam GDSL-like Lipase/Acylhydrolase 49 363 IPR001087 GO:0016788
Pumo4g01503 386 CDD SGNH_plant_lipase_like 48 369 IPR035669 -
Pumo4g01503 386 SUPERFAMILY SGNH hydrolase 47 366 - -
Pumo4g01503 386 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 26 373 - -
Pumo4g01503 386 Gene3D SGNH hydrolase 37 369 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01503 Pumo-Chr4 18980230 18981750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01503 45 368 Acyl Lipid Metabolism Gene Families AT4G10950 26.488 5.27e-29 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01503 4 18980230 18981750 Pumo4g01503 4 18980230 18981750 ECH