Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01274 ATGAGTACAACGTTATTAAATTACAAGGAAACAAATGATTGTGGATGCCATCTTGGTTTGGGGTGGCTAAACCAAACCACGCCTACTCCAACACTCACAGTCACTGCACTTGTTGTGATGAAGAAACTCTCATTCTCACCCTCGGATTTGGACACTAAATGTGCCTTCACTCTCTCGTTGATGCGTATGATGGGCTTCTTCGTCGCCACTTTCGTCTTCTGCTCTGTGATTTTCTCACTCTCCATTGTTCTTCGAGACCCTCCCTCTGATGCTGCCCTGCACGAACCCTCATCACTCACACCTCTCTTGCAAATCACACAAACTCTACAAGATTTGGACAATGAAACCTCTGATTCTGTTGGGTTGCAACAAGATAAACTGCTTGGTGGCCTTCTAGCTGATGGATTTGATGAACAATCTTGTCTCAGCAGGTATCAGTCTGCCATGTATTATCACAAAGGGCCATCAGAAAAGCCTTCATCTTACCTCATTTCTAGGTTAAGAAAATATGAAGCTCAGCACAAACAATGTGGACCTTACACTGAATCCTATAACAAAACAGTGGAACAACTTAGGTCTGGTGGTCAATTTACTGAGTCCTCTGATTGTAAATATGTTGTGTGGATTTCATTTAGTGGGTTAGGGAATAGGATTTTGACCCTAGCTTCTGCATTTCTCTATGCTCTCCTCACAGACCGTGTTCTACTGGTTGACCCTGGAGCAGATATGGTTGATCTCTTCTGTGAGCCATTTCCAGATGCTTCCTGGTTTCTTCCTAGTGATTTTCCTCTTAATGCTCAATTCAATAATTTCAGTCAGAATTCTGATCAATGTTATGGGAAAATGCTGAAAAATAAAGCAGTTACAGATTCCACTGTTTCATCTTTTGTCTACCTTCATATAGTCCATGATTATGATGATCATGATAAGCTTTTCTTCTGTGATGAAGAGCAACGTTTTCTCCAGAATGTGCCGTGGTTAATGATGAAAACAGATAATTACTTTGTCCCTTCTATATTCTTAATGCCATCTTTTGAGCAGGAACTGAATAATCTCTTCCCAAATAAGGAAACAGTTTTCCATTTCTTGGGTAGGTATCTGCTCCACCCCACAAACAGTGTGTGGGGACTTGTTGTCAGATACTATCAAGCTTATTTAGCTAAAGCTGATGAAAGAGTGGGCATACAAATTAGAGTGTTCGACACCGAACCTGGTCCATTTCAACATGTGTTGGATCAGATCTTAGCTTGTACTTTGAAGAAGGACATTCTGCCTGATGTTAACCACCAGCAGGATGCTACCAATTCATCAGGAATTCCCAAGTCAAAAGCAGTATTGATGACATCCTTAAACTCTGGTTACTTTGAAAAGGTAAGAGACATGTATTGGGAATATCCTACAGTGACAGGAGAAGTGGTCGGCGTTTACCAGCCGAGCCACGAAGGATATCAACAATCACAGAAGCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTATCTGTTAAGCTTAACTGATGTGTTGGTTACTAGCTCATGGTCTACTTTTGGGTATGTGGCTCAGGGGCTTGGAGGTTTAAAACCATGGATTCTGTACAAACCTGAGAATCGAACGGCCCCAAATCCTCCCTGTCGACGTGCCATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGCAAGGCCAAGAGAGGAACTGACACAGGTGAACTTGTTCCATATGTGAGGCACTGTGAGGATATGAGCTGGGGCCTTAAGCTTGTGGACAGTGATAGTTATAGGTAG 1791 0.4255 MSTTLLNYKETNDCGCHLGLGWLNQTTPTPTLTVTALVVMKKLSFSPSDLDTKCAFTLSLMRMMGFFVATFVFCSVIFSLSIVLRDPPSDAALHEPSSLTPLLQITQTLQDLDNETSDSVGLQQDKLLGGLLADGFDEQSCLSRYQSAMYYHKGPSEKPSSYLISRLRKYEAQHKQCGPYTESYNKTVEQLRSGGQFTESSDCKYVVWISFSGLGNRILTLASAFLYALLTDRVLLVDPGADMVDLFCEPFPDASWFLPSDFPLNAQFNNFSQNSDQCYGKMLKNKAVTDSTVSSFVYLHIVHDYDDHDKLFFCDEEQRFLQNVPWLMMKTDNYFVPSIFLMPSFEQELNNLFPNKETVFHFLGRYLLHPTNSVWGLVVRYYQAYLAKADERVGIQIRVFDTEPGPFQHVLDQILACTLKKDILPDVNHQQDATNSSGIPKSKAVLMTSLNSGYFEKVRDMYWEYPTVTGEVVGVYQPSHEGYQQSQKQMHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPYVRHCEDMSWGLKLVDSDSYR 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01274 596 Gene3D - 200 254 - -
Pumo4g01274 596 Pfam Xyloglucan fucosyltransferase 106 563 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pumo4g01274 596 PANTHER FUCOSYLTRANSFERASE 2-RELATED 64 591 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pumo4g01274 596 FunFam Galactoside 2-alpha-L-fucosyltransferase 376 530 - -
Pumo4g01274 596 FunFam Galactoside 2-alpha-L-fucosyltransferase 201 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01274 Pumo-Chr4 16226290 16228502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01274 61 590 Xyloglucan Fucosyltransferase1 AT2G03220 61.959 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01274 K13681 - gmx:100803305 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01274 4 16226290 16228502 Pumo4g01274 4 16226290 16228502 ECH