Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01673 ATGGAGAACATCACTCTCAACTGGTATTTTGGCAACAACAGATCAATGCTAGTCTCAAATTGTCTCTTCAGAATGGGTGGAGCTGCAGTCCTCCTCTCCAACAAGTCTTGTGATCGCAGAAGAGCCAAATACCAACTGATCCATACAGTGCGTACTCACAAGGGTGCAGATGACAAATCATATGGCTGTGTCTTCCAAGAAGAAGATGAGAAGAAAACAATTGGTGTGGCACTCTCAAAGGACTTAATGGCTGTTGCTGGAGAAGCCCTCAAGACCAACATCACAACACTTGGCCCATTAGTCCTTCCCATGTCTGAGCAGCTCTTATTTTTTGCAACTTTGGTGGCCAGAAAAGTGTTCAAGATGAAAATAAAGCCATACATCCCAGACTTTAAGCTAGCTTTTGAGCACTTTTGCATCCATGCTGGAGGAAGAGCAGTGTTGGATGAGTTGGAGAAGAATCTTGAGCTCTCTGATTGGCACATGGAGCCTTCAAGAATGACTCTCAACAGGTTTGGCAACACTTCTAGCAGCTCCTTGTGGTATGAATTGGCCTACACTGAAGCTAAAGGGAGGATCAGGAAGGGTGACAGGACTTGGCAGATTGCATTTGGTTCAGGATTCAAGTGCAACAGTGCTGTGTGGCGTGCATTGAGGACCATTAATCCAGCAAAGGAGAAAAATCCTTGGATGGATGAGATTCACGAGTTTCCTGTTCATGTGCCTAAAGTGGCAACCATTGGTTCCTAA 750 0.452 MENITLNWYFGNNRSMLVSNCLFRMGGAAVLLSNKSCDRRRAKYQLIHTVRTHKGADDKSYGCVFQEEDEKKTIGVALSKDLMAVAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSDWHMEPSRMTLNRFGNTSSSSLWYELAYTEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTINPAKEKNPWMDEIHEFPVHVPKVATIGS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01673 249 Pfam FAE1/Type III polyketide synthase-like protein 1 119 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pumo3g01673 249 CDD CHS_like 1 215 - -
Pumo3g01673 249 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 136 216 IPR013747 -
Pumo3g01673 249 SUPERFAMILY Thiolase-like 1 42 IPR016039 GO:0016746
Pumo3g01673 249 SUPERFAMILY Thiolase-like 23 219 IPR016039 GO:0016746
Pumo3g01673 249 PANTHER 3-KETOACYL-COA SYNTHASE 1 240 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pumo3g01673 249 Gene3D - 1 217 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01673 Pumo-Chr3 25794883 25795632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01673 1 247 Miscellaneous Gene Families AT2G26640 85.020 8.89e-162 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01673 3 25794883 25795632 Pumo3g01673 3 25794883 25795632 ECH