Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01416 ATGGCACTCTCGCGTCTTTGTCATCCTCTCTTCTCTCGTTCCCTTCGCATCCTCTCTTCTCCCGCCAGATCCCTCTCCAGAACTTTTACTTCAACGATTTTTACCGTCGGAGGTGATCAGAATATAAGGCCTGCACCTTGCTCTAGGCTTACTGGAATTCGTGATAGATCTTTGAAGTCAAAGTGGACTGATGTCAAATACTTTTCATCTTCAGATTCTTCACATGAAGTCCTTGGGATGCCTGCTTTATCTCCTACAATGACCCAAGGTAATATTGCAAAATGGAGGAAGAAAGAAGGAGAAAAGATAGAAGTGGGGGATGTACTATGTGAAATTGAAACTGACAAAGCTACACTAGAATTTGAAAGTCTTGAAGAAGGATTTCTGGCTAAGATATTGGTACCTGAAGGTTCAAAGGACGTGCCTGTTGGACAACCAATTGCAATAACAGTTGAGGATGAAAATGACATCCAAAATGTTCCTGCTTCTGTGGGGGGTGAGACCAGGGCTGAAGAGAAGAAACCAACACATGAGGATGTTACAGATGAGAGGAAATCAGAATCAACTTCTACTATAATTAATGCATCAGAACTTCCACCTCATGTCGTTCTTGAAATGCCGGCTTTGTCACCGACAATGAACCAAGGAAACATTGCTAAATGGAGGAAACAAGAAGGAGACAAGATTGAAGTGGGTGATATATTATGTGAGATAGAGACAGACAAAGCTACACTTGAATTTGAAACTCTTGAAGAGGGGTACCTGGCTAAGATACTTGCTCCAGAAGGTTCAAAAGAAGTGGCAGTTGGACACCCTATTGCAATAACAGTTGAAGATGCAAGTGATATTGAAGCTATAAAGAATTCTGTCAGCAGCAGTTCAACAAACCAACAGAAGGCCCCCCAACGTGACACTAAAAGCGAGGTCAAAGCTCAGAAAAACAATATAACACGAATCAGTCCAGCTGCAAAGTTGCTAATTACAGAGTATGGATTGGATGCATCAGCATTGAATGCAACTGGTCCTTACGGCACCCTACTGAAAGGGGATGTTCTTTCTGCAATTAAGTCAGGAAAATTGTCTCCAAAACCTGCTTCACCTAAAGAAAAGGCATCGTCATCTCAAAGTCATCAACAAGTTGCAGCTTCCCAAGAGTCAAAGTCTGACTTAAAGCAGTCAGATGCTTATGAAGATTTTCCTAATAGTCAAATTCGCAAGGTGATCGCCAAGAGATTATTGGAATCAAAACAAGATACACCACACTTATATTTATCATCAGATGTCATCCTGGATCCTCTTCTTTCCCTTCGAAAGGATCTTAAAGAGAAGTATGATGTTAAAGTTTCTGTGAATGACATTATTATCAAAGTTGTAGCTGCTGCTCTCAGAAATGTACCAGAAGCAAACGCATACTGGAATGTTGAGAAGGGTGAGGTGATTTTAAATGATTCTATTGACATATCCATAGCAGTTGCCACTGAGAAGGGCCTGATGACTCCAATAATAAAAAATGCTGATCAGAAGACAATATCTGCTATCTCCTCAGAGGTCAAGGAACTAGCTGCAAAGGCACGTGATGGCAAATTGAAGCCACATGAATTCCAAGGGGGAACTTTTAGCATTTCAAACTTAGGAATGTTTCCTGTGGATAAATTTTGTGCTATTATAAACCCCCCTCAGGCTTGTATTCTTGCTGTAGGGAGAGGCAACAAAGTTGTGGAACCAGTAATTGGAGCTGATGGAATTGAGAAGCCATCAATTGCCACTAAGTTGAGCTTAACATTGTCTGCTGATCATCGTGTTTTTGATGGCAAAGTTGGAGGTGCATTTCTCTCTGCTTTGCAATCAAACTTCAGTGATATAAGACGACTTCTTTTATAA 1881 0.4099 MALSRLCHPLFSRSLRILSSPARSLSRTFTSTIFTVGGDQNIRPAPCSRLTGIRDRSLKSKWTDVKYFSSSDSSHEVLGMPALSPTMTQGNIAKWRKKEGEKIEVGDVLCEIETDKATLEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDENDIQNVPASVGGETRAEEKKPTHEDVTDERKSESTSTIINASELPPHVVLEMPALSPTMNQGNIAKWRKQEGDKIEVGDILCEIETDKATLEFETLEEGYLAKILAPEGSKEVAVGHPIAITVEDASDIEAIKNSVSSSSTNQQKAPQRDTKSEVKAQKNNITRISPAAKLLITEYGLDASALNATGPYGTLLKGDVLSAIKSGKLSPKPASPKEKASSSQSHQQVAASQESKSDLKQSDAYEDFPNSQIRKVIAKRLLESKQDTPHLYLSSDVILDPLLSLRKDLKEKYDVKVSVNDIIIKVVAAALRNVPEANAYWNVEKGEVILNDSIDISIAVATEKGLMTPIIKNADQKTISAISSEVKELAAKARDGKLKPHEFQGGTFSISNLGMFPVDKFCAIINPPQACILAVGRGNKVVEPVIGADGIEKPSIATKLSLTLSADHRVFDGKVGGAFLSALQSNFSDIRRLLL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01416 626 ProSiteProfiles Biotinyl/lipoyl domain profile. 75 151 IPR000089 -
Pumo3g01416 626 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 IPR003016 -
Pumo3g01416 626 Gene3D - 318 359 IPR036625 GO:0016746
Pumo3g01416 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 71 175 - -
Pumo3g01416 626 MobiDBLite consensus disorder prediction 160 190 - -
Pumo3g01416 626 Gene3D - 380 626 IPR023213 -
Pumo3g01416 626 MobiDBLite consensus disorder prediction 358 395 - -
Pumo3g01416 626 SUPERFAMILY Single hybrid motif 78 166 IPR011053 -
Pumo3g01416 626 Pfam Biotin-requiring enzyme 204 275 IPR000089 -
Pumo3g01416 626 Pfam Biotin-requiring enzyme 78 149 IPR000089 -
Pumo3g01416 626 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 311 357 IPR036625 GO:0016746
Pumo3g01416 626 MobiDBLite consensus disorder prediction 288 302 - -
Pumo3g01416 626 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 100 129 IPR003016 -
Pumo3g01416 626 SUPERFAMILY Single hybrid motif 201 294 IPR011053 -
Pumo3g01416 626 CDD lipoyl_domain 202 275 - -
Pumo3g01416 626 ProSiteProfiles Biotinyl/lipoyl domain profile. 201 277 IPR000089 -
Pumo3g01416 626 NCBIfam pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 204 617 IPR006257 GO:0004742|GO:0006090|GO:0045254
Pumo3g01416 626 MobiDBLite consensus disorder prediction 367 395 - -
Pumo3g01416 626 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 194 626 IPR045257 GO:0006086|GO:0045254
Pumo3g01416 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 197 301 - -
Pumo3g01416 626 MobiDBLite consensus disorder prediction 288 314 - -
Pumo3g01416 626 Gene3D - 197 302 - -
Pumo3g01416 626 Gene3D - 69 175 - -
Pumo3g01416 626 SUPERFAMILY CoA-dependent acyltransferases 390 626 - -
Pumo3g01416 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 381 624 - -
Pumo3g01416 626 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 396 625 IPR001078 GO:0016746
Pumo3g01416 626 MobiDBLite consensus disorder prediction 167 186 - -
Pumo3g01416 626 CDD lipoyl_domain 80 149 - -
Pumo3g01416 626 Pfam e3 binding domain 318 352 IPR004167 GO:0016746
Pumo3g01416 626 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 318 355 IPR004167 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01416 Pumo-Chr3 22322127 22337362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01416 194 626 Acyl Lipid Metabolism Gene Families AT3G13930 40.830 3.14e-106 330
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01416 3 22322127 22337362 Pumo3g01416 3 22322127 22337362 ECH