Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01360 ATGGCTATTGGTCATGCCATATTTGTTATCTTCATACTCTCTCTGAGTGCAAGATGCTGTGGACAAGAAGACCTTGATATGTTAGCTCCTATGGAGAAAGCAGAGCAGGAAGCTCTATACTCCACCATTCAAGGCTTTGTTGGTGATTCCTGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGTTGGACACCAATTCAGGGGGTCTCTTGTGATCTATATAATGGGTTTTGGTATGTTACTGTCTTGAACATTGGACCCGTCCATGACAATTCTCTGAGTTGTGCTCAAGATTTGGAATTGGAATTTAGACCAGAGTTATTTGAGCTCAAGCACCTAAAATCTCTATCCTTCTTCAATTGCTTTCAATCACAGGACATGTTTCCAGCTACCATCCCCACTGGAAACTGGCAGAAACTGGCTGGCAGCTTAGAATCACTGGAGTTTAGATCAAACCCGGGTCTCATTGGAAACATCCCCTCAAGTTTTGGTTTCCTCAAGAACCTCCAATCACTAGTAATACTAGAAAATAGTGTAACAGGTGAAATACCATCAACCATTGGCAATCTCATCAAGTTGAAGAAGCTTGTTCTTGCTGGAAACTATCTTACTGGGAGGATTCCAGATGTTTTTGAAGGGCTAAATGAGTTATTGATCTTTGATTTAAGTAGCAACTCATTGTCTGGGTCTTTGCCTTTGACACTTGGGAGCTTAACTTCAGCATTGAAGCTTGATGTGAGCAACAATCATCTTGATGGGAATCTTCTAAATGAATTTGCTAATCTTAAGAATCTGACCCTTATGGACCTTAGGAATAACAAATTCACTGGTGGATTGACCTTGTCTTTGCAAGAGATGCCCTCCTTAGAGGAATTGGTTTTGTCCAACAATCCATTGGGTGGAGACATCAGGTCCCTAAAGTGGGAAAACCTCAAGAACTTGGCCATTTTGGAACTATCTAACATGGGATTGACGGGGGAAATTCCTGAGTCTTTATCAGAATTAAAGAGGTTGAGATTTTTGGGACTTAGTGACAACAACCTCACGGGCAATCTGTCACCAAAGCTGGAAACTCTGCCTTGTCTCAATGCACTTTACCTTAGTGGAAACAATCTCACAGGAGAGCTTAGCTTCTCTAAAGACTTTTTTGGAAAAATGGGGAGGCGTTTTGGGGCTTGGAACAACCCCAACCTTTGCTACCAAGTTGGAGTAATGTCAACAAGCCATGTTCCATATGGGGTAAAGCCATGCCAGAAAGAGGTCAATTTGTTAGAATCTAATTCAAAAACTGAGCTGATCAATGGGGATATGAATGAGACTTTCCATTTCATAGCCTCTAAGGGATTTTCTGGCTGTGCTACTAATGGCTTCTGGTGGACTTTTATGGAAGAAATATTGATGATGGGTTTATTTCTACTTCTTATATAG 1428 0.4139 MAIGHAIFVIFILSLSARCCGQEDLDMLAPMEKAEQEALYSTIQGFVGDSWNGSDLYPDPCGWTPIQGVSCDLYNGFWYVTVLNIGPVHDNSLSCAQDLELEFRPELFELKHLKSLSFFNCFQSQDMFPATIPTGNWQKLAGSLESLEFRSNPGLIGNIPSSFGFLKNLQSLVILENSVTGEIPSTIGNLIKLKKLVLAGNYLTGRIPDVFEGLNELLIFDLSSNSLSGSLPLTLGSLTSALKLDVSNNHLDGNLLNEFANLKNLTLMDLRNNKFTGGLTLSLQEMPSLEELVLSNNPLGGDIRSLKWENLKNLAILELSNMGLTGEIPESLSELKRLRFLGLSDNNLTGNLSPKLETLPCLNALYLSGNNLTGELSFSKDFFGKMGRRFGAWNNPNLCYQVGVMSTSHVPYGVKPCQKEVNLLESNSKTELINGDMNETFHFIASKGFSGCATNGFWWTFMEEILMMGLFLLLI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01360 475 FunFam Piriformospora indica-insensitive protein 2 34 207 - -
Pumo3g01360 475 FunFam Piriformospora indica-insensitive protein 2 208 304 - -
Pumo3g01360 475 Gene3D Ribonuclease Inhibitor 33 208 IPR032675 -
Pumo3g01360 475 Pfam Leucine rich repeat 192 251 IPR001611 GO:0005515
Pumo3g01360 475 PANTHER OS05G0588300 PROTEIN 7 209 - -
Pumo3g01360 475 Gene3D Ribonuclease Inhibitor 307 403 IPR032675 -
Pumo3g01360 475 Gene3D Ribonuclease Inhibitor 209 306 IPR032675 -
Pumo3g01360 475 FunFam Piriformospora indica-insensitive protein 2 305 406 - -
Pumo3g01360 475 SUPERFAMILY L domain-like 43 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01360 Pumo-Chr3 21568430 21571133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01360 143 417 Receptor kinase-like Gene Family AT4G08850 30.545 1.00e-23 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01360 3 21568430 21571133 Pumo3g01360 3 21568430 21571133 ECH