Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01357 ATGACTGACATCACTGACGATATTGCCGAGGAAATCTCCTTCCAGAGCTTCGATGATGACTGCAGGTTGCTCGGTAATCTCCTCAATGACATTCTCCAGCGTGAAGTTGGCACCAACTTGGTTGACAAGCTCGAAAGGATTCGAGTCCTTGCTCAGAGTGGTTGTAATATGAGACAGGCGGGTATTCTGAACATGGCAGAGCTGCTTGAGAAGCAGTTGGCTTCAGAGTTGTCAAAGATGACACTAGAAGAAGCTTTCACCCTTGCTCGTGCCTTCAGCCATTATCTTACTTTGATGGGTATAGCTGAGACCCATCATAGGGTTCGTAAAGGAGGGAATATGGCACAAATTGCAAAATCTTGCGATGATATATTTAACCAGCTGGTGCAGGGTGGAGTTCCCCCAGAAGAACTTTATGACACAGTCTGCAAGCAGGAGGTCGAAATTGTTCTCACCGCTCATCCCACACAGATTAACCGTCGAACCTTACAGTTCAAACACGTTAGAATTGCTCACCTTTTGGATTATAATGATCGACCTGATCTTAGCACTGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAGCTTAGGCGCCAAAAACCCACTCCAGTTGATGAAGCTAGAGCTGGTTTCAATATTGTGGAGCAGTCACTCTGGAAAGCTGTCCCTCATTATTTACGTCGTGTCAGCAATGCATTAAAGAAGCATACGGGAAAGCCACTTCCATTGACTTGCACTCCCATAAAGTTTGGATCTTGGATGGGAGGTGATAGAGATGGAAACCCAAATGTGACAGCAAAGGTCACAAAAGATGTTTCACTTCTATCTAGATGGATGGCGATTGACCTCTATATTCGGGAAGTGGATAGCCTCAGATTTGAGCTATCCATGAACCAGTGCAATGATAAGTTGTCAAGACTGGCACATGAAATTCTAGAAGCTAACCACGAGAATCGCCGTGAGAATTGGAATCAATCTGCGAATAGAAGTCACACACTTCCAACACAACTTCCAGCTAGAGCTCATTTACCTTCTATTGCTGAAAATGGTGAATCTCGGCATCCCAGACTAGACATTCCAGCACCTGATTACATGCAATCCAATCACAAGGATGGTGGTGTTTCTTTAAGTTCAACTACATCAAAAAATGCCAATCCCAATATTCGATTACCAGGAACAAGTTCAGCAAATTCCAGTGCTTCTTCAGCTGCACTTGGTCAGAAGAAATTGTATGCAGAATCCCAGACAGGAAAGTCCACTTTTCAAAAGCTTTTGGAGCCAATGCTTCCTCAACTTCCTGGAATTGCTCCTTACAGAATTGTCCTGGGGAATGTTAAGGATAAGCTTGAGAAAAGTCGTAGACGGTTAGAACTTCTTCTTGAGGATGTTGCATGTGACTATGATCCTTTGGGTTACTATGAAACATCTGATCAGCTTTTGGAACCTCTGCTCCTCTGTTATGAATCTCTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTGCTGATCTGATTCGTAGAGTTGCTACCTTCGGAATGGTGTTAATGAAGCTTGACTTGCGTCAGGAATCTGGGAGACATGCAGAAGCACTTGATGCAATAACACAGTACTTAGATATGGGTACTTACAGTGAATGGGATGAAGAAAAGAAGTTGGACTTCTTAACAAGAGAACTGAAAGGGAAGAGGCCTCTAGTTCCTGTTAGTATAGAGGTTCCTTCTGATGTTAAAGAAGTCTTGGATACATTCCGAATTGCCGCTGAACTGGGGAGTGATTCTCTTGGAGCTTATGTGATCTCTATGGCCTCAAATGCAAGTGATGTCCTTGCAGTAGAGCTTTTACAGAAGGATGCACGTCTTGCTGCTATTGGGGAGTTGGGAAAAGCATGTCCTGGTGGAACGTTGCGGGTGGTCCCTCTGTTTGAAACTGTGAAGGACCTGAGAGGAGCTGGTTCAGTTATCCGAAAACTTTTATCAATAGACTGGTACCGTGAACACATCATTAAGAATCACAATGGACATCAAGAGGTTATGGTTGGATATTCTGATTCTGGTAAAGATGCTGGCCGCTTTACCGCTGCATGGGAACTTTTCAAAGCTCAGGAGGATGTTGTATCTGCTTGCAATGATTATGGTATAAAGGTTACACTATTCCATGGCCGTGGAGGCAGTATTGGTCGTGGTGGTGGCCCCACATATCTGGCTATTCAGTCCCAACCTCCTGGGTCTGTGATGGGAACGCTTCGGTCTACTGAGCAGGGAGAGATGGTAGAGGCCAAGTTTGGGTTGCCACAGATAGCTGTTAGACAACTTGAGATATACACAACAGCAGTGCTACTTGCAACCCTTCGTCCACCTATCCCACCACGAGAAGAAAAATGGCGTAATGTCATGGAAGAGATCTCAAACATCAGTTGCCAGTGTTACCGCAGTGTAGTGTATGAAAATCCAGAATTCCTGGCCTACTTCCATGAAGCCACACCAGAGGCAGAACTTGGCTTCCTTAACATAGGTAGCCGCCCTACAAGAAGGAAGAGCTCAATAGGAATTGGACACCTGCGTGCAATTCCTTGGTTATTTGCATGGACACAAACAAGATTCGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGTTTAAAGGGAGCTTGTGAGAAAGGTCACACCGAAGAGCTAAAAGCCATGTACAAAGAATGGCCCTTCTTTCAAAGTACCATAGACCTTATTGAGATGGTTTTGGGGAAAGCTGACATTCCTATAGCCAAGCACTATGATGAAGTCCTTGTGTCAAAGGAGAGGCAAGAGCTTGGTCACGAACTAAGAAGTGAGCTCATGACAGCTGAAAAGTTTGTCCTGGTTATTAGTGGCCATGAGAAACTTCAGCAGAATAATAGGAGCTTGAGGAGGCTGATTGAGAATAGACTTCCCTTCCTCAATCCCTTGAACATGTTGCAGGTGGAGATACTCAAGAGGTTAAGACGCGATGATGACAACCGTAAAATCAGAGATGCTTTGCTTATCACCATAAATGGGATTGCTGCAGGGATGAAGAATACAGGTTGA 3099 0.4469 MTDITDDIAEEISFQSFDDDCRLLGNLLNDILQREVGTNLVDKLERIRVLAQSGCNMRQAGILNMAELLEKQLASELSKMTLEEAFTLARAFSHYLTLMGIAETHHRVRKGGNMAQIAKSCDDIFNQLVQGGVPPEELYDTVCKQEVEIVLTAHPTQINRRTLQFKHVRIAHLLDYNDRPDLSTEDREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGFNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYIREVDSLRFELSMNQCNDKLSRLAHEILEANHENRRENWNQSANRSHTLPTQLPARAHLPSIAENGESRHPRLDIPAPDYMQSNHKDGGVSLSSTTSKNANPNIRLPGTSSANSSASSAALGQKKLYAESQTGKSTFQKLLEPMLPQLPGIAPYRIVLGNVKDKLEKSRRRLELLLEDVACDYDPLGYYETSDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAEALDAITQYLDMGTYSEWDEEKKLDFLTRELKGKRPLVPVSIEVPSDVKEVLDTFRIAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAAIGELGKACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELFKAQEDVVSACNDYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVEAKFGLPQIAVRQLEIYTTAVLLATLRPPIPPREEKWRNVMEEISNISCQCYRSVVYENPEFLAYFHEATPEAELGFLNIGSRPTRRKSSIGIGHLRAIPWLFAWTQTRFVLPAWLGVGAGLKGACEKGHTEELKAMYKEWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSKERQELGHELRSELMTAEKFVLVISGHEKLQQNNRSLRRLIENRLPFLNPLNMLQVEILKRLRRDDDNRKIRDALLITINGIAAGMKNTG 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01357 1032 Pfam Phosphoenolpyruvate carboxylase 19 351 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo3g01357 1032 Pfam Phosphoenolpyruvate carboxylase 440 1032 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo3g01357 1032 Coils Coil 453 477 - -
Pumo3g01357 1032 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1032 IPR022805 GO:0006099|GO:0008964|GO:0015977
Pumo3g01357 1032 FunFam Phosphoenolpyruvate carboxylase 4 406 526 - -
Pumo3g01357 1032 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Pumo3g01357 1032 Coils Coil 308 328 - -
Pumo3g01357 1032 MobiDBLite consensus disorder prediction 358 412 - -
Pumo3g01357 1032 MobiDBLite consensus disorder prediction 381 412 - -
Pumo3g01357 1032 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo3g01357 1032 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo3g01357 1032 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo3g01357 1032 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1032 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pumo3g01357 1032 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 690 702 IPR033129 -
Pumo3g01357 1032 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 19 1032 IPR015813 GO:0003824
Pumo3g01357 1032 Gene3D Phosphoenolpyruvate/pyruvate domain 289 374 - -
Pumo3g01357 1032 Gene3D Phosphoenolpyruvate/pyruvate domain 403 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01357 Pumo-Chr3 21515818 21525579 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01357 3 21515818 21525579 Pumo3g01357 3 21515818 21525579 ECH