Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01216 ATGCCAGTGCCTCCCAAACCCATCAACACCTTCACCATCACAATCATGCTCACCTTCACTTTCTTCCTCCTCTTCTTCTCTGGCTTCCTCCACTTCCCCTCCGCCTCCTCCTCTTTCCCACCCATCCGCCGCCCCATCACGACGCCGGCGGCGGAACCCTTTTCCGATCTGGTCGGGGCCTTCAGGAACTGGGACTCGCAAGTGGGGTGCGCTCGCTTCAGAGAGAAACCAAATGGGGTGCCCCATAACCAGTCAAAGGTCGCATCTTTGCAGGAGTTTGGCGACTGTGGGGGCTTGAAACTGAACCATGTTAGCGTTTTGGTCAAAGGGTGGACTTGGATTCCGGATAACTTGGATAACTTGTACTCGTGCTCCTGTGGGTTGAGCTGCTTGTGGACCAAATCGCCAGTTCTCGCCGACAAGCCTGATGCTTTGTTGTTTGAATCCTCCACGCCTCCAGTTCAGAGACGCATGGGAGAACCTCTCCGTGTATATATGGATCTTGAAGCTGGCCGAAAGAGATCAGGTCGAGAGGATTTATATATTAGTTATCATGCTGAGGATGATGTACAGTCAACCTATGCTGGTGCACTCTTTCACAACGGTCGAAACTATCACGTCTCCAATAGTAAAAACAGAGATATACTTGTTTATTGGTCTTCATCACGGTGTCTTTCTCAAAGGAATGAACTCGCCAAGAAACTCCTCAGTTTACTGCCGCATCATTCATTTGGCAAGTGCCTAAATAATGTTGGTGGTCTAGACATGGCTCTTTCTCTTTATCCCGAATGTGCAAATGACGCCAACGTTACACCAAAATGGTGGGATCATTTACATTGCGCCATGTCTCACTACAAGTTTGTTCTTGCAATTGAGAACACTTTTACTGAGAGCTATGTGACAGAGAAGTTATTCTATGCCTTAGACTCTGGTGCAGTTCCTATCTATTTTGGTGCACCAAATGTCATGGATTTTGTTCCTCCACATTCAATAATAGATGGTAGAAAGTTCAACTCATTGGAAGAGTTGGCTTCATACGTGAAGGCGGTTGCGAATGACCCGGTGGCCTATGCAGAATACCATGCATGGAGAAGGTGTGGTGTACTGGGAAACTATGGAAAAACCCGAGCTGTGAGCCTTGACACGTTGCCATGCCGATTATGTGAGGCTGTTAGCAGAAAAGGTGGAAGAAATGCACGAAGCTAG 1206 0.4801 MPVPPKPINTFTITIMLTFTFFLLFFSGFLHFPSASSSFPPIRRPITTPAAEPFSDLVGAFRNWDSQVGCARFREKPNGVPHNQSKVASLQEFGDCGGLKLNHVSVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSPVLADKPDALLFESSTPPVQRRMGEPLRVYMDLEAGRKRSGREDLYISYHAEDDVQSTYAGALFHNGRNYHVSNSKNRDILVYWSSSRCLSQRNELAKKLLSLLPHHSFGKCLNNVGGLDMALSLYPECANDANVTPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLFYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFNSLEELASYVKAVANDPVAYAEYHAWRRCGVLGNYGKTRAVSLDTLPCRLCEAVSRKGGRNARS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01216 401 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 212 394 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pumo3g01216 401 FunFam Alpha-(1,4)-fucosyltransferase 163 369 - -
Pumo3g01216 401 PIRSF FucT_plant 3 401 IPR017177 -
Pumo3g01216 401 Gene3D - 165 368 IPR038577 -
Pumo3g01216 401 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 105 393 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pumo3g01216 401 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 98 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01216 Pumo-Chr3 19590386 19594672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01216 3 399 Xyloglucan Fucosyltransferase1 AT1G71990 68.750 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01216 K14412 - gmx:100792300 759.985