Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00586 ATGAGTGATCCCAACAAAGAAGAACCGTTATCGAAAGCTGCAAGAGCAGCAGAAGATCTTTACCATCTTCGAGACACTTATTTCCCATCCAACCCCGATGACAGAATCTCCAAGTTGCAACACAAGTCCGATCTCGCTCTTAAACTCCTCGATTCCATTCCCCAAGAACAAAGAAAATCACCCATGCAACGTGCAACATTTGAATATCTTAGAGGGAAGATGTTGGATGTATTTCCTGACTATAGGAAAGAAGCTGAGGATCATCTATCAAAAGCTGTTAAGTTAAACCCATCTCTTGCAGATGCTTGGCTATGTTTAGGAAATTGCATTTGGAAGAAAGGAGATTTAACTGCTGCAAAGAACTGCCTCAATCTTGCATTAGACAAGGGTCCTAACAAAAAGATACTTTGTCAATTATCAATGCTTAAAAGAAAAATGTCTCAAGGTGCGGAGAATCAAGCAGAACTGGTTGAAGAAAGCATTCAGCATGCCAAGGAAGCAATCACTTTGGATGTCAAGGATGGGAACTCTTGGTATAATCTTGGAAACGCCTGCCTTACAAGTTTTTTTGTCACTGGAGCTTGGGATCATACCAAACTTTTACATTCTTTAAAAGCATATCAAAATGCTGAGAAAGATGAAAGCATGAAGTCCAATCCAGATTTATATTTTAATAGTGCTACTGTTAACAAATATCTAGAGAACTACCAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTAAAGGATCCAGGTCTCAATGCTGCAGAGGAGGTTCAGAAGATAGTCAATTTACTTGACAAGGTGGACAATCTTTTGAAGGGACATGTAAGAGCTAAGCGAATGGCATCTTTGGCATCATCATTGGTTGCTGTTGATTTGAAATCGTCATACAGAAGAGTTACCATAGACCTTCTTTCAGAGGGTCCAAATAGAGCTCTTGCAGTAGAAGGGAAAGTTTTTTTCTTTGTTAGGAGTGAGAGTGTTGCTCCCTTATACTATTTACTTTGTGATTCAAATCAATCTTGCTTTGTTCTCTCGATTTATGGTGTACGTACTGATGTGATTAAAGAAGGAGATCAGCTAACATTGCTTGACCCTTATTTTCGTGATGTTGATTTGTCCTGGAAGGAGAAGCATTACCAGTTCAAATCTATACGCCTGGATTTCTATGAACAAGTGCTTGTAAATGGAAAAGCTTTGACTCCTCAACAAGCTGTTCGTACTTCAATATATGCTCAACATAAAGCCTGA 1254 0.3947 MSDPNKEEPLSKAARAAEDLYHLRDTYFPSNPDDRISKLQHKSDLALKLLDSIPQEQRKSPMQRATFEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLTAAKNCLNLALDKGPNKKILCQLSMLKRKMSQGAENQAELVEESIQHAKEAITLDVKDGNSWYNLGNACLTSFFVTGAWDHTKLLHSLKAYQNAEKDESMKSNPDLYFNSATVNKYLENYQRALSGFEAAALKDPGLNAAEEVQKIVNLLDKVDNLLKGHVRAKRMASLASSLVAVDLKSSYRRVTIDLLSEGPNRALAVEGKVFFFVRSESVAPLYYLLCDSNQSCFVLSIYGVRTDVIKEGDQLTLLDPYFRDVDLSWKEKHYQFKSIRLDFYEQVLVNGKALTPQQAVRTSIYAQHKA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00586 417 SUPERFAMILY TPR-like 72 244 IPR011990 GO:0005515
Pumo3g00586 417 Gene3D Tetratricopeptide repeat domain 2 276 IPR011990 GO:0005515
Pumo3g00586 417 SMART tpr_5 220 253 IPR019734 GO:0005515
Pumo3g00586 417 SMART tpr_5 100 133 IPR019734 GO:0005515
Pumo3g00586 417 Coils Coil 147 167 - -
Pumo3g00586 417 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 25 348 - -
Pumo3g00586 417 Pfam Tetratricopeptide repeat protein 5 OB fold domain 298 409 IPR032076 -
Pumo3g00586 417 Gene3D - 277 417 IPR038645 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00586 3 8934855 8943425 Pumo3g00586 3 8934855 8943425 ECH