LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo3g00573	ATGAATAGGCGCGGTTATTGTTCCCGCCAAGTGTGTTGCATCTTCGGCGCAATGGAGCAAGAGAATCACAAAATCAAGGCAGTGAATTTGCTTCGAAGCAGAATCTGTGATCCCAAATTCATCTTCATCAACGATTCTCCAGACAGCAACTACAGCAAGCTGAAATTCATGATATCGAGTTCGGTGACGGAGGCGTGCAACAATTCTATTCTGCTTCTCGGTCCCCGTGGCTCCGGCAAGAACGCGGTTTTGGAACTTGTCATTCAAGATTTGCTGCAAGAGTATCCGGACTCGATTTCAGTGATAAGGTTGAATGGGCTTTTACACAGTGACGACATCTCTGCGTTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCAATTGCTATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAATTTATGGTGGCCATGCTAAAGGAATGCGGATTAGCACATAAAACGGTAATTTTTGTTCTGGACGAGTTTGACCTCTTTGCTCAGGGTAAACAGCGGTTACTTTATAGCTTGCTAGATGCAATGCAATCAATAACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGTCTGGATGCAGATCAGCTGTTGGAGAAAAGAGTACGATCTCGTTTTTCACATAGAAAGCTGTTGTTCTTACCTCCTTCAATGGAAGATTTGCAGAGGTTTCTGGTGCACATGCTGACATTACCAATCGACTCAAGCTTTTCACATGATTATGTTGTTGAATTTAACAGAAAGGTCCAAAATATTATAGAAGATAGAAGGTTCAAAGAAACCCTCAATAAATATTTAAATGTTGATTCCTCTGTCAAACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCATATGGATTTGCAGACTGGGTTCCTGTCTCAGGAGAACTTAGAAATTGCATTTTCAACTATCCAGAGGCAGCCCAAACTGGAATGTTTAAAAAATTGCTCCATTTTAGAACTTCAGATTTTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGCAAAGTTTATGCAACTTCAATTCTGTAATGGAAGAGTATAAACGTGATTCCTTTAAGACTCAAATGTGTGTCTCATATTCTGCAGAGTATAAACGTGATTTCTTCAAGACTCGTTCTTCTGCAAGAAATGTCTGCTTAAGGGCATTTGAACACCTTATACATCGTGAATTGATATGTTTCACAGACAATAGAGGACAGAGTTTGTCTGTTGAATTCCGTCCTGTAAAGCTTTTAATTTCATCTGCTGAACTACATCAGGGACTAAGAGCAAACAATTCATGCCCTCCTATGCTTCTAAAGTTAATGGATCGTGAAGGCTAA	1347	0.4053	MNRRGYCSRQVCCIFGAMEQENHKIKAVNLLRSRICDPKFIFINDSPDSNYSKLKFMISSSVTEACNNSILLLGPRGSGKNAVLELVIQDLLQEYPDSISVIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAMLKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDLQRFLVHMLTLPIDSSFSHDYVVEFNRKVQNIIEDRRFKETLNKYLNVDSSVKHLLRFLFCAVSHMDLQTGFLSQENLEIAFSTIQRQPKLECLKNCSILELQILVCMKRLEVKEQSLCNFNSVMEEYKRDSFKTQMCVSYSAEYKRDFFKTRSSARNVCLRAFEHLIHRELICFTDNRGQSLSVEFRPVKLLISSAELHQGLRANNSCPPMLLKLMDREG	448

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo3g00573	448	PIRSF	ORC4	14	448	IPR016527	GO:0000808\|GO:0003677\|GO:0005634\|GO:0006260
	Pumo3g00573	448	PANTHER	ORIGIN RECOGNITION COMPLEX SUBUNIT 4	26	447	IPR016527	GO:0000808\|GO:0003677\|GO:0005634\|GO:0006260
	Pumo3g00573	448	FunFam	Origin of replication complex subunit 4	48	222	-	-
	Pumo3g00573	448	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	61	279	IPR027417	-
	Pumo3g00573	448	Pfam	AAA ATPase domain	52	185	IPR041664	-
	Pumo3g00573	448	Pfam	Origin recognition complex (ORC) subunit 4 C-terminus	233	428	IPR032705	-
	Pumo3g00573	448	Gene3D	-	48	222	IPR027417	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo3g00573	18	445	Core DNA Replication Machinery Family	AT2G01120	62.187	0.0	540

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo3g00573	3	8790851	8795379	Pumo3g00573	3	8790851	8795379	ECH