Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00567 ATGTCTCAGTCTCAGAACAAGAACCAGAACGGGAAGTGGGTGAGAATTACCCCAGAAGAACTTCGAGCCTCCTCCAATGGACACGTGGCAGTGGGAGGTTCCAGCAGGCTCTGCATAAACCCTCGGAGAGATCACAAGTCCGAAAGCTACGAGGACCTTCAATTGGAGTTCAACCCTCTCGTCTTCAGCTCTCTCGAGCAGTATTTGCCTCCTCACATGTTGAACCAATCACGTGACGTTAAGGTTCAGTACATGAGGAACATTCTGCTTCGCTATTTGCCCGAGAGTGAGCGCATTCGGATTCAAAAACACAAGGAATACAGACATAGGATCATGCTGAATTATCCACCGCTACATAAGCAGATATATACTATGGATGCTGAGAAATTTTTCACACCATCATTTCTTAGAGCAATTAAAGAAAATACAGAAGGAAGTTTTAGAAGTATAATGGCTGAACCTCGTAAAGGAATTTATACATTTGAAATGCTTCAACCACAATTTTGTGAAATGCTGGTATCTGAGGTGGATAACTTTGAAAGATGGGTGCATGACACAAAATTCAGAATCATGCGACCAAATATAATGAATCAATATGGTGCCGTTCTTGATGATTTTGGCATGGAGTCCATGCTGGACAGATTGATGAGTGACTTCATAAGTCCTTTATCTCGAGTTTTCTACACTGAAATTGGTGGAACCTCGCTGGACTCTCATCATGGGTTTGTTGTTGAATATGGAATTAACAGGGATGTGGAACTTGGCTTCCATGTGGATGACGCAGAAGTCACCTTAAATATTTGCTTGGGAAAAGAATTTTCTGGTGGAGAACTGTTCTTCCGGGGTGTTCGATGTGATGAACATGTAAATTCAGATATCCAACCAGGGGAGATCTTCGATTATTCCCATGTTCCTGGACATGCAATTCTTCATCCTGGTCGTCACCGGCATGGCGCTAGACCTACTACATCTGGGAGTCGGATGAATTTAATTATCTGGTGTAGAAGTTCGGCTTTTAGAGAGTTGAAGAAATATCGGAAAGATTTTTCTAGCTGGTGTGGAGAATGCAAACGCAAGAAGAAGGAGAAAGAGCGTCTATTAGTTATGGCCACCCAACAGGAATTAATGAAGAGGGAAATGCAACCGGCCTCGTGA 1155 0.4303 MSQSQNKNQNGKWVRITPEELRASSNGHVAVGGSSRLCINPRRDHKSESYEDLQLEFNPLVFSSLEQYLPPHMLNQSRDVKVQYMRNILLRYLPESERIRIQKHKEYRHRIMLNYPPLHKQIYTMDAEKFFTPSFLRAIKENTEGSFRSIMAEPRKGIYTFEMLQPQFCEMLVSEVDNFERWVHDTKFRIMRPNIMNQYGAVLDDFGMESMLDRLMSDFISPLSRVFYTEIGGTSLDSHHGFVVEYGINRDVELGFHVDDAEVTLNICLGKEFSGGELFFRGVRCDEHVNSDIQPGEIFDYSHVPGHAILHPGRHRHGARPTTSGSRMNLIIWCRSSAFRELKKYRKDFSSWCGECKRKKKEKERLLVMATQQELMKREMQPAS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00567 384 Gene3D q2cbj1_9rhob like domain 104 336 - -
Pumo3g00567 384 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 237 336 IPR005123 -
Pumo3g00567 384 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 25 365 - -
Pumo3g00567 384 SMART p4hc 156 335 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00567 Pumo-Chr3 8689450 8694090 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00567 3 8689450 8694090 Pumo3g00567 3 8689450 8694090 ECH