Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00299 ATGGAAACCCAACTTGACTACAAAACTAAAAGAGCAAACCCCACTTCCCCAACGCGCTTGAAGCTCTTTGGGTTCAGCGTACACCACGAAGACATCATGGAAGAAGACGAGGTGGTGCTGCATGATGACGTGGCAGACTCCCCCACCAAGGCCACCTCCACTTCCCCTTCCCCATCTGACTCGCCGGACTCCTCCCTCGCCGGCGCCGGACCTCCTTCCTCGGGCGACCGGAAATATGAGTGCCAATACTGCTGCCGAGAGTTCGCAAATTCACAAGCACTTGGTGGACACCAGAACGCGCACAAGAAGGAGCGTCAGCAACTGAAGCGCGCGCAGTTACAAGCCACTCGAAACGCTGCCGTTTCGTTCGTGCGGAACCCGATGATCTCCGCCTTCGCCCCTCCGCCGCACCTGCTGGCTCCACCGGGGTCCGTGATGGTCCCGGCGGCGGCGCCCTCTTGGGTGTACGTGCCGCCACGTGCCGCGCCTCCTCCCTTCCACGTGTCAGTGTCGCACGGTTGTGCGTTCCCGTCGGCGCATGGCAACAACAACGGCTTCAGTAGTAGTAATAATGGCAGCAATAGTAACGTGACCATAACGGGTGTGAAATCTGCGGGTGCAGGGATGTTTCCCTATGTTGGCGTTGTAGGAGATTCGTCATTAGCTTTGTCAACGGTGCAGGTTCAGGCCCGGGCCCACCATGCTACAATTGATGGGCCCTCTTCGAGTAGGTTTTCCAAAGGTGATGGTGGGCCCAAATTTGATGATGCATGGGGCTTGGACTTGCATCTTAGTCTTGCGCCAGCTGCGCCCTGA 816 0.5797 METQLDYKTKRANPTSPTRLKLFGFSVHHEDIMEEDEVVLHDDVADSPTKATSTSPSPSDSPDSSLAGAGPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPMISAFAPPPHLLAPPGSVMVPAAAPSWVYVPPRAAPPPFHVSVSHGCAFPSAHGNNNGFSSSNNGSNSNVTITGVKSAGAGMFPYVGVVGDSSLALSTVQVQARAHHATIDGPSSSRFSKGDGGPKFDDAWGLDLHLSLAPAAP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00299 271 FunFam Zinc finger protein GIS3 67 129 - -
Pumo3g00299 271 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Pumo3g00299 271 MobiDBLite consensus disorder prediction 47 68 - -
Pumo3g00299 271 MobiDBLite consensus disorder prediction 34 74 - -
Pumo3g00299 271 Gene3D Classic Zinc Finger 64 126 - -
Pumo3g00299 271 PANTHER ZINC FINGER PROTEIN 5 11 270 IPR044299 GO:0010090
Pumo3g00299 271 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Pumo3g00299 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00299 Pumo-Chr3 3882297 3883405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00299 4 270 C2H2 Transcription Factor Family AT1G68360 44.245 4.48e-53 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00299 3 3882297 3883405 Pumo3g00299 3 3882297 3883405 ECH