Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00263 ATGGCTGACGACGAACCACTATATCCAATAGCAGTGCTTATAGATGAATTGAAAAATGATGACATCCAGCTGCGGTTGAACTCAATTCGCAGGCTATCAACAATTGCACGTGCTCTTGGGGAGGAGCGAACCCGTCGAGAGTTAATTCCATTTTTGAGTGAAAATAATGATGATGATGATGAAGTACTTCTTGCAATGGCAGAAGAGTTGGGAGTGTTCATTCCTTATGTTGGGGGAGTGGAACATGCCAGTGTGTTGCTGCCACCGCTGGAGACACTTTGCACTGTTGAGGAAACCTGTGTGAGAGATAAAGCTGTGGAGTCACTTTGTAGAATTGGATCTCAAATGAGGGAGAATGATTTGGTTGAATATTTCATTCCATTGGTGAAGAGATTGGCAGCAGGTGAATGGTTTACTGCCCGAGTCTCTGCATGTGGACTATTTCATATTGCATACCCTAGCGCACCAGAAACATCAAAGACAGAGTTGAGATCAATATACAGTCAGTTATGTCAGGATGACATGCCTATGGTTAGAAGGTCGGCTGCATCAAATCTTGGGAAATTTGCTGCAACTGTTGAATATGCTCATTTGAAGGCTGATGTCATGTCAATTTTTGAGGATCTTACTCAAGATGATCAAGATTCTGTCAGATTGTTGGCTGTGGAGGGCTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGATTGTGTTGCACATATACTCCCAGTTATTGTTAACTTCTCCCAGGATAAGTCTTGGCGTGTGCGTTACATGGTTGCAAATCAATTGTATGAGCTTTGTGAAGCTGTAGGCCCTGAACCTACCAGAACGGAATTGGTACCTGCTTATGTGCGGTTGCTTCGAGATAATGAGGCTGAAGTACGCATAGCAGCTGCTGGAAAAGTGACCAAGTTTTGCCGGATTTTAAATCCAGATCTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGAATTGTCATCAGATTCTTCACAGCATGTCCGCTCTGCTTTGGCTTCAGTAATAATGGGAATGGCTCCAGTTTTGGGAAAGGAAGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTCCCTTTTGAAGGATGAATTTCCCGACGTGCGCTTAAACATTATCAGCAAGCTTGATCAAGTGAATCAGGTTATAGGAATCGATCTGTTATCTCAGTCTTTGTTACCAGCCATTGTTGAGCTTGCTGAGGATAGGCATTGGAGGGTCCGGCTTGCAATTATAGAATATATACCCTTATTGGCAAGTCAATTGGGGGTTGGGTTTTTTGATGACAAGCTTGGTGCTCTTTGCATGCAGTGGTTACAGGATAAGGTTCATTCAATTCGCGAAGCAGCTGCTAACAACTTGAAACGCCTTGCTGAAGAATTTGGACCTGAGTGGGCTATGCAGCACATAATTCCTCAGGTTTTGGAGATGAACAACAATCCACACTATTTGTATCGGATGACTATTCTTCGTGCTATCTCTCTGCTTGCTCCTGTGATGGGCCCTGAAATCACATGTTCAAACTTGTTACCAGTTGTTGTTGCTGCATCAAAAGACAGAGTGCCCAACATAAAGTTCAATGTGGCAAAGGTATTAGAGTCCATCTTCCCCATCGTTGATCAGTCTATGGTGGAGAAGACTATTCGTCCATGTTTGGTTGAGCTCAGTGAGGATCCTGATGTTGATGTGCGATTTTTCTCCAACCAAGCACTACAGGCAATTGATCATGTCATGATGTCTAGCTAG 1761 0.4361 MADDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRRELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHASVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRENDLVEYFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPETSKTELRSIYSQLCQDDMPMVRRSAASNLGKFAATVEYAHLKADVMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILNPDLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIIPQVLEMNNNPHYLYRMTILRAISLLAPVMGPEITCSNLLPVVVAASKDRVPNIKFNVAKVLESIFPIVDQSMVEKTIRPCLVELSEDPDVDVRFFSNQALQAIDHVMMSS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 397 435 IPR021133 -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 241 279 IPR021133 -
Pumo3g00263 586 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 1 580 - -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 358 396 IPR021133 -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 202 240 IPR021133 -
Pumo3g00263 586 Pfam HEAT repeat 241 269 IPR000357 GO:0005515
Pumo3g00263 586 Pfam HEAT repeats 360 460 - -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 86 124 IPR021133 -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 553 586 IPR021133 -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 163 201 IPR021133 -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 436 474 IPR021133 -
Pumo3g00263 586 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 3 581 - -
Pumo3g00263 586 SUPERFAMILY ARM repeat 4 579 IPR016024 -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 514 552 IPR021133 -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 475 513 IPR021133 -
Pumo3g00263 586 Gene3D - 2 582 IPR011989 -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 280 318 IPR021133 -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 319 357 IPR021133 -
Pumo3g00263 586 ProSiteProfiles HEAT repeat profile. 9 47 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00263 Pumo-Chr3 3357221 3362832 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00263 3 3357221 3362832 Pumo3g00263 3 3357221 3362832 ECH