Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02476 ATGTTGGAGGCAAAAGACTCGACGATCAAGCTCTTCGGGAGGACGATCCCGGCGCCGGAGATCCCCGCCGGAGCTCCGGCATTGTCTTCTGGTGATGTTGTTGGCGACAGTGTTGGTCAGAACCATGGCTCTTCAAGTGTCAATGGGGGTGGTGAAGAGCACGAGATTGAGCAGGACACAATGGGAGAGGAATCAACTGAGAGCAAGAAGGAAGATCAAGTGACCAATCTTGATACTGTCTCAAGACCAGGGGAAGAGTCTATTAACCCCTATACCGAGAAAGAGGATCTTACATTGAAAACTTCAAAAAAGACTGAACAAGAACAAGGTGAAAATTCACAAGATAAAACCCTGAAAAAGCCGGACAAAATACTGCCTTGCCCCCGCTGCAATAGCATGGACACCAAGTTCTGCTACTACAATAATTACAATGTCAACCAACCCCGCCATTTCTGCAAGAATTGCCAGAGATACTGGACTGCTGGTGGAGTGATGAGGAATGTTCCTGTGGGTGCTGGTCGCAGGAAGAACAAGAATTTCGCTTCTCAGTATTGTCAGATAACTGTTCCTGAAGCAGCACTCTCAAATTCTCAGCCGGACTTGCCAAATGGAGTCCATCATCCTTCCTTGAACTGTGATGCCACACTCCTTGCATTTGGGTCTGATACACCCTTGTGTGAATCAATGACATCTGTTTTGAACCTTTCTGATAAAGCAGTGAACAATTCCACAACAAATGGATTTAATGGCTCTGAAGAACTAGAAATTCCTGTTACTTATGTTGGTGGAGAAAAAGTGAATGATGATTCCAATAAATCTACTGACACATCAACAAAGCCAATGGAAGGTGAAACCACCATTAATAGGTCCCAAGAACAAGTCATAGAGAATTGTCGTCCCTTCCCACCTCAGGCTCCCTACTTTCCTGGTGCCGCTTGGCCTTTCCCATGGAATCCAGCACTGTGGAGCTCCCCAGTACCATCACCACCTGCTTTTTTCCCACAAGGATATACCATGCCTCTCCATCCTGCAGCAGCTTATTGGGGTTTTACCATACCGGGTGCCTGGAGCATCCCATGGCTAGCGCAACCATCATTACCAAATAGTACAGTGTCTAACTCTGGTCCTAACTCCCCAACCTTGGGCAAACATTCAAGGGAAGAAAACATGCTTAAATCCAATGAGGCAGCAGTTGAGGATGAACGTAGCAAGGGAAATAATAAAGAAAAGTGTCTATGGGTTCCAAAAACATTGAGGATTGATGACCTAGGAGAAGCAGCAAAAAGCTCTATATGGACAACACTAGGGATTAAACATAATAAAGCAGACTTAGTTCCTGGAGGAGGACTCTTCAAATCATTCCCATCACAGGGTGGTGAAAAAAATCGTGTAATACATAACACACCGGTCTTGCAGGCCAATCCAGCAGCACTGTCTAGGTCAATTAACTTTCACGAGACCTCATAA 1467 0.456 MLEAKDSTIKLFGRTIPAPEIPAGAPALSSGDVVGDSVGQNHGSSSVNGGGEEHEIEQDTMGEESTESKKEDQVTNLDTVSRPGEESINPYTEKEDLTLKTSKKTEQEQGENSQDKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKNFASQYCQITVPEAALSNSQPDLPNGVHHPSLNCDATLLAFGSDTPLCESMTSVLNLSDKAVNNSTTNGFNGSEELEIPVTYVGGEKVNDDSNKSTDTSTKPMEGETTINRSQEQVIENCRPFPPQAPYFPGAAWPFPWNPALWSSPVPSPPAFFPQGYTMPLHPAAAYWGFTIPGAWSIPWLAQPSLPNSTVSNSGPNSPTLGKHSREENMLKSNEAAVEDERSKGNNKEKCLWVPKTLRIDDLGEAAKSSIWTTLGIKHNKADLVPGGGLFKSFPSQGGEKNRVIHNTPVLQANPAALSRSINFHETS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02476 488 MobiDBLite consensus disorder prediction 52 76 - -
Pumo2g02476 488 MobiDBLite consensus disorder prediction 368 390 - -
Pumo2g02476 488 Pfam Dof domain, zinc finger 122 179 IPR003851 GO:0003677|GO:0006355
Pumo2g02476 488 MobiDBLite consensus disorder prediction 17 123 - -
Pumo2g02476 488 PANTHER CYCLIC DOF FACTOR 2 5 488 IPR045174 GO:0003700|GO:0006355
Pumo2g02476 488 MobiDBLite consensus disorder prediction 263 285 - -
Pumo2g02476 488 ProSitePatterns Zinc finger Dof-type signature. 127 163 IPR003851 GO:0003677|GO:0006355
Pumo2g02476 488 ProSiteProfiles Zinc finger Dof-type profile. 125 179 IPR003851 GO:0003677|GO:0006355
Pumo2g02476 488 MobiDBLite consensus disorder prediction 368 384 - -
Pumo2g02476 488 MobiDBLite consensus disorder prediction 34 48 - -
Pumo2g02476 488 MobiDBLite consensus disorder prediction 88 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02476 Pumo-Chr2 54099594 54102510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02476 6 488 C2C2-Dof Transcription Factor Family AT5G39660 43.411 8.25e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pumo2g02476 zf-Dof 7.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02476 - - gmx:100775675 873.618