Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01509 ATGGCAGCAACCATTCCTTTCTCTCTGCTTAGGAACTGCTCGCCACTGAAACTAGCAACGCCTTTCGCTCGCAAAGCCTCCAACTTTAATCTTCTTCTCCCTCTTCAACCACGCAGGTTGGTCTCTAGTACTTGTGCCACGCACAATGAAGAGGCTGCAGCAAAAGCAGCTGCTATTAATTTTGATAGTGAAGCTCCAACAATATTTGATAAGATCATAAATAAGGAAATCCCTTCAAGCATTGTATATGAAGATGAAAAGGTTCTGGCATTTCGTGACATTAATCCACAGGCTCCAGTTCATGTTCTAGTCATTCCAAAATTAAGAGATGGATTAACTCAACTTGGGAAGGCTGATAGTAGGCATGGGGAAATATTGGGTCAACTTCTCTATGCTGCCAAAATTGTAGCTGAGAAAGAAGGTATCGTTGATGGATTCCGTGTCGTCATCAACAATGGTCCTAGTGCCTGTCAATCTGTGTATCATCTGCACTTGCATGTATTAGGTGGGAGACAGATGAATTGGCCACCAGGTTGA 537 0.432 MAATIPFSLLRNCSPLKLATPFARKASNFNLLLPLQPRRLVSSTCATHNEEAAAKAAAINFDSEAPTIFDKIINKEIPSSIVYEDEKVLAFRDINPQAPVHVLVIPKLRDGLTQLGKADSRHGEILGQLLYAAKIVAEKEGIVDGFRVVINNGPSACQSVYHLHLHVLGGRQMNWPPG 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01509 178 SUPERFAMILY HIT-like 66 177 IPR036265 -
Pumo2g01509 178 Gene3D - 46 178 IPR036265 -
Pumo2g01509 178 ProSitePatterns HIT domain signature. 151 169 IPR019808 -
Pumo2g01509 178 ProSiteProfiles HIT domain profile. 68 178 IPR011146 GO:0003824
Pumo2g01509 178 CDD PKCI_related 66 170 - -
Pumo2g01509 178 PANTHER HISTIDINE TRIAD HIT PROTEIN 44 178 IPR001310 -
Pumo2g01509 178 FunFam Histidine triad nucleotide-binding protein 1 48 178 - -
Pumo2g01509 178 Pfam HIT domain 75 172 IPR011146 GO:0003824
Pumo2g01509 178 PRINTS Histidine triad family signature 68 84 IPR001310 -
Pumo2g01509 178 PRINTS Histidine triad family signature 158 168 IPR001310 -
Pumo2g01509 178 PRINTS Histidine triad family signature 89 107 IPR001310 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01509 Pumo-Chr2 23970423 23973046 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01509 2 23970423 23973046 Pumo2g01509 2 23970423 23973046 ECH