Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01481 ATGACCTGTGCCGCCTGCTCCAATTCCGTCGAATCAGCTCTCAAATCACTCGACGGCGTCATCAGCGCCTCCGTCGCGCTGCTTCAGAACAAAGCCGACGTCGTTTTCAACTCGGCTCTGCTCAAGGATGAAGACATAAAAAATGCAATTGAAGATGCTGGGTTTGAAGCAGACATATTACCTGAATCCAGTACAGTTGGAAAGGTGCCACATGGAACCCTGGTGGGACAGTTCACAATTGGAGGTATGACATGTGCAGCATGTGTAAATTCTGTTGAAGGTATTTTAAGAAATCTTCCAGGTGTCAAAAGGGCTGTGGTAGCTTTGGCTACTTCGTCAGGTGAAGTTGAATATGATCCCAGTGTAATTAGTAAAGATGATATAGTCAATGCGATTGAAGATTCAGGTTTTGATGGTTCATTTATACAAAGCAATGAGCAGGATAAAATAATTTTAGGGGTGGTTGGTGTGTACAGTCTGATTGACGCACAAGTTTTAGAAGGCATTCTTATCAGCACAAAAGGAGTAAGGCAGTTTCATTTTGACCAGATTTCAGGTGAATTGGATGTTCTGTTTGATCCTGAAGTTCTCAGTTCTAGATCCGTAGTTGATGCAATCCAGGAAGGAAGCAATGGAAAGTTGAAATTACATGTTAGAAGCCCGTACACAAGAATGGCTTCTAAAGACGTTGAAGAGACCTCAACTATATTTCGGCTCTTTATCTCCAGTCTGTTTCTTAGTATTCCTCTCTTCTTCATGAGGGTAGTTTGTCCTCATATACCACTAGTCTATTCCTTGTTACTTTGGCGATGTGGGCCTTTCCTCATGGGTGATTGGTTGAAATGGGCATTGGTGAGTCTCATCCAATTTGTGATTGGTAAGCGCTTCTACATTGCAGCTGGCAGAGCTCTTAGAAATGGTTCTACAAACATGGATGTCCTGGTTGCTGTGGGAACTACTGCTTCTTACGTTTATTCTGTTTGTGCTCTTCTATATGGTGCTCTTACTGGATTTTGGTCTCCAACTTACTTTGAAACAAGCGCTATGCTCATAACATTTGTATTGTTGGGCAAGTATTTGGAATGCCTTGCCAAGGGAAAGACATCTGATGCTATCAAGAAATTAGTAGAACTTGCTCCTGCAACAGCTTTACTAGTTGTCAAAGATAAAGGTGGTAAATCCATTGAAGAAAGGGAAATTGATTCTTTGCTTGTTCAACCTGGGGACACATTGAAAGTTCTTCCTGGTGCAAAGATTCCTGCGGATGGTATTGTTACTTGGGGCTCAAGTTATGTAAATGAGAGCATGGTAACCGGTGAATCTGTACCTATTTTGAAGGAGGTGAATGCTCCTGTTATTGGAGGCACAATAAATTTGCATGGTGTCCTTCATGTTCAAGCTACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATTATTAGTTTGGTTGAGACAGCCCAGATGTCCAAAGCTCCCATTCAGAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTTCGGTTGTTTCTTTGGCATTATTGACATTATTGGGTTGGTATATTGCTGGGTCTATTGGAGCTTACCCAGAAGAATGGCTGCCAGAAAATGGAAATCACTTTGTTTTTGCCCTAATGTTCTCAATATCTGTAGTAGTAATTGCATGTCCCTGTGCACTTGGCTTGGCAACACCAACGGCTGTCATGGTGGCAACAGGGGTTGGGGCTAACAATGGAGTGTTAATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAGAGGGTGAAGTATGTGATATTTGATAAAACAGGCACTCTAACTCAGGGAAAAGCCACTGTTACTACTGCCAAGACATTCACAGGAATGGAACGTGGAGAATTTCTTAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTAGCAAAAGCAATTTTAGCATATGCACGTCATTTTCATTTCTTTGATGACTCTTCTGCTACTACTGGTACCGAGGATGATGCAATTGCAAAGTCTGGGTGGCTTTTTGATGTCTCAGACTTCTCTGCTCTTCCTGGAAGAGGTGTTCAATGTTTTATAGATGGGAAGCGTATTTTGGTTGGTAACAGGAAGTTGATGGAGGAAAATGGCATAGATATTTCAACAGAAGTGGAAAATTTTGTGGTAGAGCTGGAAGAAAGTGCAAAGACAGGGATACTGGTAGCATATAATGATATATTAACTGGAGTCCTGGGGATTGCAGACCCACTAAAGAGAGAGGCTTCTGTAGTCATAGAGGGCCTCCAGAAAATGGGTGTCACACCTGTTATGGTTACAGGAGATAACTGGAGAACGGCTCGTGCTGTTGCCAAGGAGGTTGGCATCCAAGATGTTAGGGCAGAGGTTATGCCAGCTGGAAAAGCTGACGTTGTTCGTTCATTCCAAAAAGATGGGAGCATAGTTGCAATGGTGGGTGATGGTATCAATGATTCTCCTGCATTAGCTGCTGCTGATGTTGGTATGGCGATTGGGGCTGGAACTGACTATTGCAATAGAAGCCGCCGAGTATGTGCTGATGAAAAATAA 2562 0.4282 MTCAACSNSVESALKSLDGVISASVALLQNKADVVFNSALLKDEDIKNAIEDAGFEADILPESSTVGKVPHGTLVGQFTIGGMTCAACVNSVEGILRNLPGVKRAVVALATSSGEVEYDPSVISKDDIVNAIEDSGFDGSFIQSNEQDKIILGVVGVYSLIDAQVLEGILISTKGVRQFHFDQISGELDVLFDPEVLSSRSVVDAIQEGSNGKLKLHVRSPYTRMASKDVEETSTIFRLFISSLFLSIPLFFMRVVCPHIPLVYSLLLWRCGPFLMGDWLKWALVSLIQFVIGKRFYIAAGRALRNGSTNMDVLVAVGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGKSIEEREIDSLLVQPGDTLKVLPGAKIPADGIVTWGSSYVNESMVTGESVPILKEVNAPVIGGTINLHGVLHVQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPSVVSLALLTLLGWYIAGSIGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQRVKYVIFDKTGTLTQGKATVTTAKTFTGMERGEFLKLVASAEASSEHPLAKAILAYARHFHFFDDSSATTGTEDDAIAKSGWLFDVSDFSALPGRGVQCFIDGKRILVGNRKLMEENGIDISTEVENFVVELEESAKTGILVAYNDILTGVLGIADPLKREASVVIEGLQKMGVTPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDYCNRSRRVCADEK 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01481 853 SUPERFAMILY HAD-like 596 841 IPR036412 -
Pumo2g01481 853 Gene3D - 564 852 IPR023214 -
Pumo2g01481 853 FunFam Copper-exporting P-type ATPase A 73 142 - -
Pumo2g01481 853 SFLD p-type atpase 579 841 IPR044492 -
Pumo2g01481 853 ProSitePatterns Heavy-metal-associated domain. 80 109 IPR017969 GO:0046872
Pumo2g01481 853 SUPERFAMILY HMA, heavy metal-associated domain 1 61 IPR036163 GO:0046872
Pumo2g01481 853 NCBIfam HAD-IC family P-type ATPase 350 618 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo2g01481 853 NCBIfam HAD-IC family P-type ATPase 674 837 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo2g01481 853 Gene3D - 365 487 - -
Pumo2g01481 853 CDD P-type_ATPase_Cu-like 238 840 - -
Pumo2g01481 853 SFLD Haloacid Dehalogenase 579 841 - -
Pumo2g01481 853 ProSiteProfiles Heavy-metal-associated domain profile. 74 140 IPR006121 GO:0046872
Pumo2g01481 853 Gene3D - 604 696 IPR023299 GO:0000166
Pumo2g01481 853 Gene3D - 697 747 IPR023299 GO:0000166
Pumo2g01481 853 PRINTS P-type cation-transporting ATPase superfamily signature 433 447 - -
Pumo2g01481 853 PRINTS P-type cation-transporting ATPase superfamily signature 597 611 - -
Pumo2g01481 853 PRINTS P-type cation-transporting ATPase superfamily signature 741 752 - -
Pumo2g01481 853 PRINTS P-type cation-transporting ATPase superfamily signature 763 773 - -
Pumo2g01481 853 PRINTS P-type cation-transporting ATPase superfamily signature 816 835 - -
Pumo2g01481 853 CDD HMA 77 138 IPR006121 GO:0046872
Pumo2g01481 853 Pfam haloacid dehalogenase-like hydrolase 593 830 - -
Pumo2g01481 853 FunFam Copper-exporting P-type ATPase A 1 60 - -
Pumo2g01481 853 ProSitePatterns E1-E2 ATPases phosphorylation site. 599 605 IPR018303 -
Pumo2g01481 853 Gene3D - 1 62 - -
Pumo2g01481 853 FunFam Copper-transporting ATPase RAN1 604 695 - -
Pumo2g01481 853 SUPERFAMILY HMA, heavy metal-associated domain 73 146 IPR036163 GO:0046872
Pumo2g01481 853 SUPERFAMILY Calcium ATPase, transmembrane domain M 334 588 IPR023298 -
Pumo2g01481 853 SUPERFAMILY Calcium ATPase, transduction domain A 397 483 IPR008250 -
Pumo2g01481 853 Pfam Heavy-metal-associated domain 1 56 IPR006121 GO:0046872
Pumo2g01481 853 Pfam Heavy-metal-associated domain 78 138 IPR006121 GO:0046872
Pumo2g01481 853 ProSiteProfiles Heavy-metal-associated domain profile. 1 58 IPR006121 GO:0046872
Pumo2g01481 853 CDD HMA 1 57 IPR006121 GO:0046872
Pumo2g01481 853 Gene3D - 76 141 - -
Pumo2g01481 853 Pfam E1-E2 ATPase 380 576 - -
Pumo2g01481 853 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 842 - -
Pumo2g01481 853 NCBIfam heavy metal translocating P-type ATPase 311 841 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pumo2g01481 853 FunFam Copper-transporting ATPase 1, putative 365 487 - -
Pumo2g01481 853 FunFam Copper-exporting P-type ATPase 696 747 - -
Pumo2g01481 853 NCBIfam copper ion binding protein 1 57 IPR006122 GO:0005507
Pumo2g01481 853 NCBIfam copper ion binding protein 77 138 IPR006122 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01481 Pumo-Chr2 22062484 22069822 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01481 2 22062484 22069822 Pumo2g01481 2 22062484 22069822 ECH