Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01469 ATGGCAAGGAAATCTTTAGCTTGGTCCTTGCTTCTGGGGATGGCTTGTTCCATAGTTATTGGTTCATATGAGGAGAGCTTGCCTCCTAGGACATTTTCTAGTGGCAACTATCATGAAGCAGTACAAAGATTGCAGTCATTTAAGGCCTCTCTAACTAGACATGATTCCATTGCTTCAGCACCATCTTCCTCATCACCCTTCTCAAGCCCTTCTTCTGCTCCTGCTCCTTCCCCTTCTCCTCTCTCACTTCAGGGTGTGAACAATCCACGCGTGTACCGTGTGACATCTTATGGTGCAGATCCAACGGGTAATTCAGATAGCACTGAAGCACTCCTTGCAGCCATAGAAGATGCAGTCAAGGGTCCTAGTGAAGGATATTTGATGGAAGGGATCAGAGACCTTGGAGGTGCTCAGATTAATCTTGAGGGTGGAAATTACTTGATCAGCCAGTCACTGAAGTTGCCGGTGGCTGGCGTGGGGAACCTTATGATACATGGGGGGACTATAAGAGCCTCAGATAATTTTCCAGAAGACGGCTATGTCATTGATTTGTCACCATCTTCTAATGGAGGAAACAGTTTACCATCCTACAATTTTGAGTTCATAACTCTCAAGGACCTCTTGCTGGACTCAAACTTCAGGGGAGGAGGCATTTCAGTCATAAACTCACTTAGGATTAACATAGACAATTGTTACATCACACATTTCACCACCAATGGAATTTTAGTCGAAAGTGGCCATGAAACCTACATTAGGAACTCTTTCCTTGGCCAGCATATAACTGCTGGTGGTGACAAAAATGAGAAGAACTTCTCAGGCACTGGAATAACCCTCCAGGGTAATGACAATGCTGTCACAGATGTTGTAATTTTCTCTGCTGCTATAGGAATAATGGTTATTGGTCAGGCAAATGCTTTTTCTGGTGTGCATTGTTACAATAAAGCCACTGGATTTGGAGGTACTGGCATTTATTTGAAAGTACCCGGTTTGACACAAACAAGGATTGTGAATTCTTACATGGATTACACTAGTATAGTGGCAGAAGACCCGGTTCAACTCCATATCTCTAGCAGTTTCTTCCTTGGTGATGCCAATATTGTCCTAAAGTCCAAGAATGGAATTGTGAATGGTGTTAATATTGTTGATAACATGTTCTCAGGTTCAAATCAGGGGGTTGAAATTGTTCAGCTAGACCAATCAAATAGTCCCTTCCAACAAATTGATCAAGTTATTGTTGATAGAAACATTGCAAGGGGGATGAAGTTAAAGGCCACAGTTGCAAAAATGTCTATGCAAGGGAATGGAACCTCTTGGAGTGTTGATTTTAACAATGTTTTGCTTTTCCCTAACCTTATAAAGAATGTTCAGTACTCTTTAAGCTCCACAGGCAGCACCTTCCCCAATCATGCTCTGAGGAACGTGTCTGAGAATCGTGTTGTGATTGAAACAAATGAAGCAGTAGCTGCCAATGTTTTTGTTACTGTGGATCAAAGTGCTGTCAAGTTGAAGAAGGTTTGA 1518 0.4242 MARKSLAWSLLLGMACSIVIGSYEESLPPRTFSSGNYHEAVQRLQSFKASLTRHDSIASAPSSSSPFSSPSSAPAPSPSPLSLQGVNNPRVYRVTSYGADPTGNSDSTEALLAAIEDAVKGPSEGYLMEGIRDLGGAQINLEGGNYLISQSLKLPVAGVGNLMIHGGTIRASDNFPEDGYVIDLSPSSNGGNSLPSYNFEFITLKDLLLDSNFRGGGISVINSLRINIDNCYITHFTTNGILVESGHETYIRNSFLGQHITAGGDKNEKNFSGTGITLQGNDNAVTDVVIFSAAIGIMVIGQANAFSGVHCYNKATGFGGTGIYLKVPGLTQTRIVNSYMDYTSIVAEDPVQLHISSSFFLGDANIVLKSKNGIVNGVNIVDNMFSGSNQGVEIVQLDQSNSPFQQIDQVIVDRNIARGMKLKATVAKMSMQGNGTSWSVDFNNVLLFPNLIKNVQYSLSSTGSTFPNHALRNVSENRVVIETNEAVAANVFVTVDQSAVKLKKV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01469 505 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Pumo2g01469 505 MobiDBLite consensus disorder prediction 55 86 - -
Pumo2g01469 505 MobiDBLite consensus disorder prediction 55 70 - -
Pumo2g01469 505 SMART pbh1 375 396 IPR006626 -
Pumo2g01469 505 SMART pbh1 223 245 IPR006626 -
Pumo2g01469 505 SMART pbh1 280 301 IPR006626 -
Pumo2g01469 505 SMART pbh1 159 184 IPR006626 -
Pumo2g01469 505 FunFam Polygalacturonase QRT3 94 492 - -
Pumo2g01469 505 Pfam Pectate lyase superfamily protein 94 317 IPR024535 -
Pumo2g01469 505 SUPERFAMILY Pectin lyase-like 90 475 IPR011050 -
Pumo2g01469 505 PANTHER POLYGALACTURONASE QRT3 31 498 IPR039279 GO:0004650
Pumo2g01469 505 Gene3D - 92 504 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01469 Pumo-Chr2 21955376 21957718 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01469 2 21955376 21957718 Pumo2g01469 2 21955376 21957718 ECH