Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02146 ATGATGATGGTGTTCGATGAGATGGGGCTTTGTAATGATTTGGATGCGATATCTGCTCCCCTTGGAGAGGAGGATATTACTGCCCGGCAAACTGATCCAGAAGCAATAGTTGAGGATGATTCTAGCGATGAAGAAATTGGGGTAGATGAACTTGAACAGAGGATGTGGAAGGACAAAATGCGTCTCAAGCGATTGAAGGAGCAAAGTAAATCTAAGGAAGGAATTGATGCAATGAAGCTGAGGCAGTCCCAAGAACAGGCAAGGAGGAAAAAGATGTCTAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGTAAGGCCCAGGGATTTGTCTATGGGATTATTCCCGAGAAGGGAAAACCGGTGACTGGGGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTCCGGTTTGATCGAAATGGTCCTGCTGCCATAGCCAAGTATCAAGCTGATAATGCTATCCCTGGGAGGAATGATGGATGCAATTCCATTGGTCCAACTCCACACACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCGCTCATGCAGCACTGTGATCCCCCTCAGAGGCGGTTTCCATTGGAGAAGGGTGTTCCTCCACCATGGTGGCCCACAGGAAATGAAGAGTGGTGGCCCCAAATTGGTTTACCTAATGATCAAAGTCTTCCTCCTTACAAGAAGCCGCATGACCTGAAGAAAGCGTGGAAAGTTGGAGTTCTGACTGCAGTTATCAAGCACATGTCTCCTGATATTTCCAAAATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAGATGACAGCCAAGGAAAGTGCAACCTGGCTTGCAATCGTCAATCAAGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGATTATTGTCCCCCATTAGCCTCAGCTGGAGGTAGTGGATCTTTGGTGATCAATGATAGCAATGAGTATGATGTTGAAGGGGGTGAGGATGAGCCTAACTTTGACATGGAAGACAGGAAACATGAGAATCTTCACACATCCAATCTCGGGATGGAGAGAATGAGGGGAACTCTGCCAGTTCAGCAGCCCCCTTTTTCAATGAAGGGAGAGGCTGTAACGAATTTGGATTTCATTCGGAAGAGGAAGGTCTCTAATGACTTTAACATGATGGATCTGAAAATTTACACATGTGAACACCCTCAGTGCCCTTACAGTCAAGTCCGCCTTGGTTTCCCTGACAGAATTTCTAGGGACAACCATCAATTGATTTGTGCTTATAGTAGTACTTCTTCAGATTTTGGGGGTCCAAATTTTCATGTTAACGAGGTAAAGCCGGTCATATACCCCCAGTCCTTTTTTCAACCCAAATCTACTGCTCAGCCTGCTAGTATGGTTCCACCTGTTATTGATCTGACTGGACTTGAAGTTTCAGATGATGGCCAGAAAATGATTAGTGACCTTATGACTAACTATGATACAAATGTTCAAGGCAACAAGAACACAAGTTCCTGTAATCGCGTAGCTGCAGAAAATTCCAACCTTCCTCAGCATGGCATGCAGCAGCAGCAACAGGACAACTTCATTCGCAGCAGTCAAGGAATCACAATGGAAGGCAGCATCTTTGATGAAGCTAACCTGTCCAATAATCATCACATGTTTGCAAGAGAAGAAAGTCAATTTGACCGCTTCAAAGCTTTGAATGCTCCCTTTGAGACCAATCACAGCAACAATAACTTCCATTCAATGTTTGGGTCCCTTTGTGATTTGGCATCATTTGATTTCAAGGAGGATATGCAAGGAGTAGGGATGGATGCTCTTCAGAAACAGCCAGATATCTCAATATGGTACCAGTGA 1866 0.4512 MMMVFDEMGLCNDLDAISAPLGEEDITARQTDPEAIVEDDSSDEEIGVDELEQRMWKDKMRLKRLKEQSKSKEGIDAMKLRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPNDQSLPPYKKPHDLKKAWKVGVLTAVIKHMSPDISKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARELYPDYCPPLASAGGSGSLVINDSNEYDVEGGEDEPNFDMEDRKHENLHTSNLGMERMRGTLPVQQPPFSMKGEAVTNLDFIRKRKVSNDFNMMDLKIYTCEHPQCPYSQVRLGFPDRISRDNHQLICAYSSTSSDFGGPNFHVNEVKPVIYPQSFFQPKSTAQPASMVPPVIDLTGLEVSDDGQKMISDLMTNYDTNVQGNKNTSSCNRVAAENSNLPQHGMQQQQQDNFIRSSQGITMEGSIFDEANLSNNHHMFAREESQFDRFKALNAPFETNHSNNNFHSMFGSLCDLASFDFKEDMQGVGMDALQKQPDISIWYQ 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02146 621 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Pumo1g02146 621 FunFam Ethylene insensitive 3-like 1 169 306 - -
Pumo1g02146 621 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Pumo1g02146 621 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 30 581 IPR006957 GO:0003700|GO:0005634
Pumo1g02146 621 MobiDBLite consensus disorder prediction 65 89 - -
Pumo1g02146 621 FunFam Ethylene insensitive 3-like 1 81 159 - -
Pumo1g02146 621 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Pumo1g02146 621 Coils Coil 48 68 - -
Pumo1g02146 621 Pfam Ethylene insensitive 3 49 296 IPR047091 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02146 Pumo-Chr1 49042261 49045785 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02146 3 620 EIL Transcription Factor Family AT3G20770 57.870 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pumo1g02146 EIN3 5.2e-130 No_clan