Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01862 ATGGTTTGGGTGCTGTGTGGTGTCACAGTCACAAGGTGCAGCAACAACACGGGACTCTCGGACCGTGTTCCAATTTACAAAATAAAAAAAGGGGACACCTTGTACGACATAGCGACGACAACGTTCGTGGGTTTGGTGAAGTGGCCGCAGATCCAGGTGGCGAATAATATAACCGACGTGAACAATATCACCGCCGGGGACACGCTTTATATTCCGCTCCCGTGTAGCTGCGATGAGGTGGGTGGGAGCAGTGTGGTGCACTATGCGCACCTGGTGGCGCCAAATAGCACAGTGGAGGGCATTGCTCAGGAGTTTGGTACTACACAGGAGATACTCCTCAGCCTCAATGGGATTTCTGACCCCAAAACCCTTCTGGCCGGTCAGATTCTTGATGTTCCCCTCCAAGGTACCTAA 414 0.5242 MVWVLCGVTVTRCSNNTGLSDRVPIYKIKKGDTLYDIATTTFVGLVKWPQIQVANNITDVNNITAGDTLYIPLPCSCDEVGGSSVVHYAHLVAPNSTVEGIAQEFGTTQEILLSLNGISDPKTLLAGQILDVPLQGT 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01862 137 CDD LysM 90 132 IPR018392 -
Pumo1g01862 137 SMART LysM_2 25 72 IPR018392 -
Pumo1g01862 137 SMART LysM_2 89 133 IPR018392 -
Pumo1g01862 137 SUPERFAMILY LysM domain 25 73 IPR036779 -
Pumo1g01862 137 Gene3D LysM domain 83 137 IPR036779 -
Pumo1g01862 137 ProSiteProfiles LysM domain profile. 88 132 IPR018392 -
Pumo1g01862 137 Gene3D LysM domain 24 80 IPR036779 -
Pumo1g01862 137 CDD LysM 25 71 IPR018392 -
Pumo1g01862 137 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 79 135 - -
Pumo1g01862 137 SUPERFAMILY LysM domain 88 133 IPR036779 -
Pumo1g01862 137 ProSiteProfiles LysM domain profile. 24 71 IPR018392 -
Pumo1g01862 137 Pfam LysM domain 26 72 IPR018392 -
Pumo1g01862 137 Pfam LysM domain 92 133 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01862 13 136 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 49.194 1.31e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01862 - - gmx:100804190 223.787