Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01508 ATGGGTCTCGTGTCGAATCAGCGAGGCTCGAGAACAGAAGCGGCACAAGAGGGCTTACCCGTTTCGGTTTCGGGTGGCGCGGCGAAGAGGAAATGGAGCAATCTAATGCCTCTGGTTGTGGCCTTTGTGGTTATTGCGGAGATCGCGTTTCTGGGTCGGTTGGATATGGCGAAGAACGCGGCCATGGTTGACACTCTCGCTGACTTGTTCTACCGCTCTCGCGCCGTGGTTGAAGGGGAGGATTTGGGGTTGGGTGCGGTGGTGGGTGGTGGTGATCGGAATTCTGAATCGGAGAGCTGTGAGGAGTGGTTGGAGAGGGAAGATGCTGTGACTTATTCAAGGGACTTTGCCAAAGAGCCTGTTTTTGTTTCTGGAGCTGACCAGGAGTGGAAGTTGTGTTCAGTGGGATGTAAATTTGGGTTTAGTGGGGATAAAAAACCTGATGCTGCATTTGGGTTACCTCAACCAAGTGGAACAGCTAGCGTTTTGCGATCAATGGAATCAGCAGAATACTATGCTGAGAACAATCTTGCCATGGCAAGACGGAGGGGATATAATATTGTAATGACAACCAGTCTATCATCTGATGTTCCTGTTGGATATTTTTCATGGGCTGAGTATGACATCATGGCACCGATGAAGCCAAAAACTGAAGCTGCTCTTGCAGCTGCATTCATTTCCAATTGCGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAAAATTAAACATCAAGATTGACTCTTATGGTGGTTGTCATAGGAACCGTGATGGAAGAGTGGACAAAGTGGAAGCCCTGAAGCACTACAAATTTAGCTTAGCATTTGAAAATTCTAATGAGGAAGACTATGTAACTGAAAAATTCTTCCAATCCCTTGTTGCTGGAACTGTCCCTGTGGTTGTTGGTGCTCCAAATATTCAGGATTTTGCTCCTTCTCCTGGTTCAATTTTACATATTAAAGAGATAGGGGATGCTGAATCCGTTGCAAAGACCATGAGATACCTAGCAGAAAATCCCGAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGCCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCCTGCCGCCTTTGCATTCACTTGGCCACAGTGAGTAGAGAGAAGGAAGAAAATAGTCTCGGCTTCAAGAAACGCCCTTGCAAGTGCACTAGAGGGCCAGAAACTGTATATCATATTTATGTGAGAGAAAGAGGAAGGTTTGAGATGGAGTCCATTTACTTGAGGTCTAACAATTTAACTCTGGAGGCCTTGAAGTCTGCTGTTGTTTCCAAGTTCACATCCCTGAATCATGTACCTATATGGAAGACAGAAAGACCTGAAGTTCTAAGAGGGGGCAATGATTTAAAACTCTACAGAATATACCCAGTTGGCTTGACACAAAGACAAGCTCTTTATACCTTCAACTTCAAAGGAGATGCAGATTTCAGGACTCACTTGGAAAGCAATCCTTGTGCCAAGTTTGAAGTCATTTTTGTGTAG 1533 0.4547 MGLVSNQRGSRTEAAQEGLPVSVSGGAAKRKWSNLMPLVVAFVVIAEIAFLGRLDMAKNAAMVDTLADLFYRSRAVVEGEDLGLGAVVGGGDRNSESESCEEWLEREDAVTYSRDFAKEPVFVSGADQEWKLCSVGCKFGFSGDKKPDAAFGLPQPSGTASVLRSMESAEYYAENNLAMARRRGYNIVMTTSLSSDVPVGYFSWAEYDIMAPMKPKTEAALAAAFISNCGARNFRLQALEALEKLNIKIDSYGGCHRNRDGRVDKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVVGAPNIQDFAPSPGSILHIKEIGDAESVAKTMRYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATVSREKEENSLGFKKRPCKCTRGPETVYHIYVRERGRFEMESIYLRSNNLTLEALKSAVVSKFTSLNHVPIWKTERPEVLRGGNDLKLYRIYPVGLTQRQALYTFNFKGDADFRTHLESNPCAKFEVIFV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01508 510 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 385 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pumo1g01508 510 Gene3D - 164 359 IPR038577 -
Pumo1g01508 510 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 111 384 - -
Pumo1g01508 510 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 96 459 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pumo1g01508 510 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 167 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01508 Pumo-Chr1 24649835 24656944 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01508 1 510 Xyloglucan Fucosyltransferase1 AT3G19280 66.795 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01508 K00753 - gmx:100792811 912.138