Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00841 ATGTCCATTGGATCAGGATCATCTCATAGGCTAACTCAGAAAAAGGATAGGACCAAAAGTCAGGCCCAAAGAGATACGTTGACATTCAGATTGAGAACACACAACTACTACCACCCCTTGCACATAGCAATATTAAAAGGAGATTGGAAATCTACAAAAGCTTTTCTTGACAATGACCCAAGTGCATTGACTGCAAAGATCACCACACTTGGCAGGACTGCACTGCATGTTGCAGCTGTAGGAGGGCAGTGGCAAATTGTTGAGAAGTTGGTGCAACATGTGCCTGCACAAGTACTTTCAGAGCTGGACTTGATGGGTTGCACTTGCCTGCATTATGTTGCAATGGGTGAAAACACAAGTGCTGCCAAGGCATTGGTGGCTAAAAATCCTTCTCTGACACAATTTACTGACTTGAAAGGATTCACACCACTTATGTATAGTATTACCTCTGCTAGATGCAAAGAGATGGTGTGGTACTTTGTTTTGAATACTACAGATGAGAGACCTGGCTGTCCATTCTCTGGTCCTTCTGCTGGTCTACTTGTTGTTTTGCTCACTGCTGCTGGATTTCATGATATCACTATGTATCTTCTCCAGCGCTACCCAAATTTGGTTACTCTCTCAGATTCAAATGGAAGCCTTATACTTAATGTTTTGTCAAAAATGCCCTCGAACTTCCAAATTGGATATTATTCTCTTTTCTTACCATGCTTCATTGTAAAACACTTCTGCGCAAAGACGAGACACATATCTGCTGTGAGATTGGTGGAATTTGTTTGCACACAGGTTTCAACCATGAATGACTCAGAATTCTGGCCGTCTTTTGTGAGTGCAGACATTATTTTCAATGCCACATCATCTGGCATAGTTGAAATTTTAAGGATTTGTTTCCAGTTTTTTCCTGATTTGGTTTGGACTCACATGCCAAATGAAGGATTTGTAGCTCAAATTGCCATCAAGAATCGGCAAGAAAAGGTTTTTAGTCTTATATGCAAGATGCCTATAGTTTGCAAGTTTTTAGTCCTAGCATTAGACGAATCACAGAACACCACATCACATCTAGCAGCAAGGTTTGCTTCCCCTCAACAGGCATCAATTTCTGGTGCAGCATTTCAAATGCAAAAAGAGTTACAATGGTTTAAGACATTGATAACATTGTACAATGTCCAACAGGAAGTGGAGAAATGGGATCACCCTCTTCATAAAGAAGTTAAAAACCAATATGGTAAAACACCTTGGCAATTGTTCAAGGAAGAGCATAAGCCCTTGCTTGAAGAAGCAAAGAATTGGATGAAGGACACATCAAACTCTTGTATGTTGGTGGCAACTCTTATTGCTACAGTTGTCTTTGCTGCTTCTATAAGTGTACCTGGAGGCAACCAGGACAAAGGATTTCCAACATACTTGTCAGATCACACATTCATGGTGTTTGTTGTGTCAGATGCATTGGCTTTGTTTTCCTCCATGGCTTCTCTACTGATGTTTTTATCAATCCTAACAGCACATTACGCGGAAGAAGATTTTCTCAGTAGATTACCTGAGAGAATAATATTGGGTTTGGCTTCTTTGTTCTTTTCTATAGTAACTACAATGATAGCATTTGGAGCAGCTCTGGATTTGTTGCTAAGGGAGAGACTAAAATGGGTGTCAATTCCAATTACTCTTCTGGCATGTGTCCCAGTTGCTCTATTTGCAAAGCTTCAACTTCCCTTGTTCATACAAATGATCATATCAACTTATGGTTCTCGCATATATCATCCTCAAAGTCTTTGGTAA 1776 0.402 MSIGSGSSHRLTQKKDRTKSQAQRDTLTFRLRTHNYYHPLHIAILKGDWKSTKAFLDNDPSALTAKITTLGRTALHVAAVGGQWQIVEKLVQHVPAQVLSELDLMGCTCLHYVAMGENTSAAKALVAKNPSLTQFTDLKGFTPLMYSITSARCKEMVWYFVLNTTDERPGCPFSGPSAGLLVVLLTAAGFHDITMYLLQRYPNLVTLSDSNGSLILNVLSKMPSNFQIGYYSLFLPCFIVKHFCAKTRHISAVRLVEFVCTQVSTMNDSEFWPSFVSADIIFNATSSGIVEILRICFQFFPDLVWTHMPNEGFVAQIAIKNRQEKVFSLICKMPIVCKFLVLALDESQNTTSHLAARFASPQQASISGAAFQMQKELQWFKTLITLYNVQQEVEKWDHPLHKEVKNQYGKTPWQLFKEEHKPLLEEAKNWMKDTSNSCMLVATLIATVVFAASISVPGGNQDKGFPTYLSDHTFMVFVVSDALALFSSMASLLMFLSILTAHYAEEDFLSRLPERIILGLASLFFSIVTTMIAFGAALDLLLRERLKWVSIPITLLACVPVALFAKLQLPLFIQMIISTYGSRIYHPQSLW 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00841 591 ProSiteProfiles Ankyrin repeat region circular profile. 70 93 - -
Pumo1g00841 591 SMART ANK_2a 139 171 IPR002110 GO:0005515
Pumo1g00841 591 SMART ANK_2a 70 99 IPR002110 GO:0005515
Pumo1g00841 591 SMART ANK_2a 35 65 IPR002110 GO:0005515
Pumo1g00841 591 SMART ANK_2a 105 134 IPR002110 GO:0005515
Pumo1g00841 591 ProSiteProfiles Ankyrin repeat profile. 70 93 IPR002110 GO:0005515
Pumo1g00841 591 PANTHER CASKIN 68 581 - -
Pumo1g00841 591 Pfam Domain of unknown function 429 538 IPR026961 -
Pumo1g00841 591 SUPERFAMILY Ankyrin repeat 39 220 IPR036770 -
Pumo1g00841 591 Gene3D - 21 440 IPR036770 -
Pumo1g00841 591 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00841 Pumo-Chr1 12861638 12865574 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00841 40 550 Miscellaneous Gene Families AT3G09550 21.218 1.32e-14 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00841 1 12861638 12865574 Pumo1g00841 1 12861638 12865574 ECH