Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo157g00010 ATGCAGGATCCAACGTTGTTCCAACCCATGAAACCCCACTTTCCTGAACAGGAACAACTCAAATGCCCGCGCTGTGACTCCACCAACACCAAGTTCTGCTACTTCAACAACTACAACCTCTCCCAGCCACGCCATTTTTGCAAGAACTGCAGAAGGTATTGGACCAAAGGAGGTGCCTTGAGAAACATACCCGTTGGGGGTGGAAGCAGAAAGAACACAAAGCGATCATCTTCATCATCCACCAACACCAAACGCGCTTCCCCATCACCCTCAGCTTCCTCTGCACCCGCTCCAGAACCCGACCCGACCCGGATTAGCCCCAACCCGGTTGTTGCTGGTGGGAGTTTCAGTTCCCTTTTGGCATCGAGTGGCCACTTGGGGAACCTCTTGGAGGGTCTGAATTCAAGTGGGTCGAATCTAAAAGCTGTGCAAATGGAAGAGTTTGGGGAGAATGTTAGTTCGGGTCCAGTGGTGGATCCGGGTTCGGGTCGGAATACCGGGTTGGAGATGCAAAGCAATAGGAATGCAGAGAGCTTTCTGAGTTTGCAAAATGGTGATTCAAGCTGTTGGAATGGTACTAATGGGTGGTCTAACCTTGCAATTTTCACTCCCGGGTCAAGCTTTCAGTAA 630 0.5095 MQDPTLFQPMKPHFPEQEQLKCPRCDSTNTKFCYFNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSSSSTNTKRASPSPSASSAPAPEPDPTRISPNPVVAGGSFSSLLASSGHLGNLLEGLNSSGSNLKAVQMEEFGENVSSGPVVDPGSGRNTGLEMQSNRNAESFLSLQNGDSSCWNGTNGWSNLAIFTPGSSFQ 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo157g00010 209 MobiDBLite consensus disorder prediction 150 169 - -
Pumo157g00010 209 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Pumo157g00010 209 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Pumo157g00010 209 MobiDBLite consensus disorder prediction 69 92 - -
Pumo157g00010 209 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 161 IPR045174 GO:0003700|GO:0006355
Pumo157g00010 209 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Pumo157g00010 209 MobiDBLite consensus disorder prediction 61 110 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo157g00010 11 130 C2C2-Dof Transcription Factor Family AT1G51700 60.000 6.34e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pumo157g00010 zf-Dof 4.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo157g00010 - - gmx:100798927 330.487