Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00593 ATGGCTCGCCCAGCCTTTCGCTTCACTCAAGCTGAGGTAGCAGAAATGGAGGCTATTCTTCAAGAACACAGCAATGCAATGCCACCACGTGATGTTCTTAGAGCTCTGGCAGTGAAATTCAGTGAATCAACAGATCGTAAAGGCAAGATTACAGTGCAGATGAAGCAAGTTTTGAATTGGTTCAAAAAGCGGAAATCAAGACAGACTCCTGGGAAGTCAAATACTACACCTATGCCTCCGGATGATAAAACCCCAGTAAGGAGTATGCCTCAACAACCAACAGCTGCTCCAATTCCCGCCACTTCTGCTTCAGTTCCAACAGCAGTAAAAGCAGCTCCAGAAAATTCAGTTCTGGAATTTGAAGCTAAATCTGGAAGGGATGGAGCATGGTATGATGTGGCTATCTTTCTAAATATCAGAAATTTGGAGACCAGTGATCCGGAAGTGCTGGTACGATTATCTGGTTTTAGACCTGAGGAAGATGAGTGGATTAACATTCCAAAGCATGTCAGGCCATGCTCTTTGCCATGTGAATCATCGGAATGTGTTGCAGTCATCCCTGGTGATCTCATACTTTGTTATCAGGAATGTCAGGAGCAAGCCCTTTACTTTGATGCCCATATTCTTGATGTTCAAAGACGGAGGCATGATATAAGAGGCTGTCGTTGTAGATTTTTGGTTCGCTTTGATCATGATCAGTCAGAGGAAATTGTGCCGCTGAGGAAGATTTGTCGCAGGCCCGAAACCAATTACCGGTTACAAGTTCTTCATGCTCTGAATGAGGCAGCACCTGTGGATCAGCAGAACACTGGCATGGATCCAGCAGCAAATGTTAATGTCATGAGGGCTACTACTACTGAAACAGTGCCAAAGCAGCTGATTGCATCAAACATTCATATGGAGACACCAGTTATGCAGACAAATGTTCCTCAACCTCCACAAAGTATGGATATGGGATGTGGTTCAAAAGAAAGCAGAAACAAACACTGA 990 0.4434 MARPAFRFTQAEVAEMEAILQEHSNAMPPRDVLRALAVKFSESTDRKGKITVQMKQVLNWFKKRKSRQTPGKSNTTPMPPDDKTPVRSMPQQPTAAPIPATSASVPTAVKAAPENSVLEFEAKSGRDGAWYDVAIFLNIRNLETSDPEVLVRLSGFRPEEDEWINIPKHVRPCSLPCESSECVAVIPGDLILCYQECQEQALYFDAHILDVQRRRHDIRGCRCRFLVRFDHDQSEEIVPLRKICRRPETNYRLQVLHALNEAAPVDQQNTGMDPAANVNVMRATTTETVPKQLIASNIHMETPVMQTNVPQPPQSMDMGCGSKESRNKH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00593 329 Pfam SAWADEE domain 118 244 IPR032001 GO:0003682
Pumo11g00593 329 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 306 IPR039276 -
Pumo11g00593 329 Gene3D - 177 249 - -
Pumo11g00593 329 MobiDBLite consensus disorder prediction 305 321 - -
Pumo11g00593 329 MobiDBLite consensus disorder prediction 70 101 - -
Pumo11g00593 329 Gene3D - 115 176 - -
Pumo11g00593 329 MobiDBLite consensus disorder prediction 61 106 - -
Pumo11g00593 329 SUPERFAMILY Homeodomain-like 3 68 IPR009057 -
Pumo11g00593 329 MobiDBLite consensus disorder prediction 305 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00593 Pumo-Chr11 20669777 20677555 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g00593 11 20669777 20677555 Pumo11g00593 11 20669777 20677555 ECH