Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00524 ATGATCGCCAAAGGCATCAAAGTGCTCCTTTCCATAGGAGGACACCCTGCCTTATCGGACTACTCCCTCAACTCCACCGAGGACGCAAAGGAGGTGGCCAACTACCTCTACACCAACTTTCTCAGTGGCCAATTTGGTCCACTCGGAAGCGTGTATTTGGACGGCATCGATTTCAACATCCAAGTCACAACGGACCACTGGGAAGACCTTGCCAGGGAACTTGACTTTTTCCGACGCACAAAAGGGCGTTACTTTCACCTATCTGCAGTCCCTCGGTGTCCAATCCCAGTTAGCAATCTCGGCAAAGCCATCGAAACGAAACTCTTCGACAACATCTTCGTCGTGTTCTTCGACAACCCGAGCTGCGAGTCTTCCTTCAAAGGCGACACCACGCCGTTGCTGGACTCATGGGACAATTGGGTCGAGTTGGTTGCGTCCAATAACTCGCTGTTCGTGGGCCTGCCGGCGTCGATAACTGCAGCCGGAACCGGTTACGTTCCGCCGACGTTGGTCAATCGTGTGGTGCTTCCACACGTGAAGAGAGCCTCCAACTACGGAGGAGTGATGCTGTGGAACAGATTCCGTGATCTTAGAAGCAATTTCAGCCGCAGGATACTGCCCAATGTGCTCAAATCCCCGTTGCTGTATGCGACATCCGTTTCAGACGCATAG 672 0.5312 MIAKGIKVLLSIGGHPALSDYSLNSTEDAKEVANYLYTNFLSGQFGPLGSVYLDGIDFNIQVTTDHWEDLARELDFFRRTKGRYFHLSAVPRCPIPVSNLGKAIETKLFDNIFVVFFDNPSCESSFKGDTTPLLDSWDNWVELVASNNSLFVGLPASITAAGTGYVPPTLVNRVVLPHVKRASNYGGVMLWNRFRDLRSNFSRRILPNVLKSPLLYATSVSDA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00524 223 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 223 IPR001223 GO:0005975
Pumo11g00524 223 Pfam Glycosyl hydrolases family 18 4 196 IPR001223 GO:0005975
Pumo11g00524 223 Gene3D Glycosidases 2 219 - -
Pumo11g00524 223 PANTHER ENDOCHITINASE 3 205 - -
Pumo11g00524 223 SUPERFAMILY (Trans)glycosidases 4 204 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00524 Pumo-Chr11 18799417 18800863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00524 3 209 Glycoside Hydrolase AT5G24090 45.238 1.40e-60 190
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g00524 11 18799417 18800863 Pumo11g00524 11 18799417 18800863 ECH