Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo10g02840 | ATGGCTGCTTCAGTTGTAGTAGGGAACGCGACCACGAACACTAACACAAACACAAACACGGGTGTGGAGTGGCACGTGCGACCTCCAAACCCTAAGAACCCAATCGTCTTCTTCGATGTCACCATCGGTAACATTCCCGCCGGTCGAATCAAGATGGAACTCTTCGCCGATATTGCCCCCAAAACCGCCGAGAATTTCAGGCAGTTCTGCACTGGGGAATACAGGAAAGCAGGACTGCCTGTTGGTTACAAAGGATGTCAATTTCATAGAGTGATTAAGGATTTTATGATTCAGGCTGGTGATTTTTTGAAGGGTGATGGTAGTGGATGTGTTTCCATCTACGGACTCAAGTTTGATGATGAAAACTTTACTGCCAAACACACTGGCCCCGGCCTTCTGTCGATGGCAAATAGTGGACCAAATACCAATGGTTGTCAGTTCTTTATAACATGCGCAAAATGTGACTGGCTTGACAACAAGCATGTCGTTTTTGGGAGAGTTCTTGGAGATGGTCTTTTGGTTGTCAGGAAGATTGAGAATGTGGCAACTGGACCCAATAACCGGCCGAAATTAGCTTGCGTCATTGCTGAATGCGGTGAAATGTAA | 606 | 0.4653 | MAASVVVGNATTNTNTNTNTGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCVSIYGLKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo10g02840 | 201 | PIRSF | Peptidylpro_ismrse | 7 | 201 | IPR024936 | GO:0003755 | |
| Pumo10g02840 | 201 | CDD | cyclophilin_ABH_like | 34 | 199 | - | - | |
| Pumo10g02840 | 201 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 83 | 100 | IPR020892 | GO:0003755|GO:0006457 | |
| Pumo10g02840 | 201 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 146 | 158 | IPR002130 | GO:0000413|GO:0003755 | |
| Pumo10g02840 | 201 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 88 | 100 | IPR002130 | GO:0000413|GO:0003755 | |
| Pumo10g02840 | 201 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 159 | 174 | IPR002130 | GO:0000413|GO:0003755 | |
| Pumo10g02840 | 201 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 131 | 146 | IPR002130 | GO:0000413|GO:0003755 | |
| Pumo10g02840 | 201 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 54 | 69 | IPR002130 | GO:0000413|GO:0003755 | |
| Pumo10g02840 | 201 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 36 | 201 | - | - | |
| Pumo10g02840 | 201 | FunFam | Peptidyl-prolyl cis-trans isomerase | 23 | 201 | - | - | |
| Pumo10g02840 | 201 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 38 | 199 | IPR002130 | GO:0000413|GO:0003755 | |
| Pumo10g02840 | 201 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 37 | 200 | IPR002130 | GO:0000413|GO:0003755 | |
| Pumo10g02840 | 201 | SUPERFAMILY | Cyclophilin-like | 24 | 201 | IPR029000 | - | |
| Pumo10g02840 | 201 | Gene3D | - | 23 | 201 | IPR029000 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo10g02840 | Pumo-Chr10 | 56640195 | 56647197 | Transposed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pumo10g02840 | 10 | 56640195 | 56647197 | Pumo10g02840 | 10 | 56640195 | 56647197 | ECH |