Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02788 ATGCTAGGAATTCTACCAGATGGAAGACAAGTTGCAGTCAAAAGGCTCTCAAGAGCTTCTAATCAAGGCTCGGAGGAGTTTAAGAATGAAGTAACTTTTATAGCTAAATTGCAACATTGCAACCTTGTAAGACTTTTGGCATGCTGCTTGGAGGAAAATGAAAAGATACTTGTATATGAGTATTTATCGAATGCAAGTCTTGACTTTCACCTATTTGATGATGAGAAAAGGAAGCAACTCGATTGGAAATTAAGATTAAGCATTATCAACGGAATAGCAAGAGGTCTTTTATACCTCCATGAGGACTCTCGACTCAAGGTAATCCACAGAGATCTCAAAGCTAGCAATGTTCTATTAGACGATGAGATGAATCCCAAAATATCGGATTTTGGATTGGCAAGAGCATTTGAAAATGGCCAGAACCAGGCAAATACAAACCGAGTAGCGGGCACTTATGGATACATGGCTCCCGAGTACACTATGGAAGGATTATTTTCAATGAAATTTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATAATTTGTGGAAGAAAGAACAGTGGATTTTTTCTATCAGAACATGGTCAAAGTCTTCTTTTATATACTTGGAGAATGTGGTGCGCAGGAAAATGTTTGGAATTGATGGATCCAGTTCTAGAAAATTCCTACATTGCCAATGAAGTTGTGAAGTGCATACAAATTGGTTTATTGTGTGTTCAAGAAGTTGCAGCAAATAGACCAACCATTTCCACTGTTGTTGTATTCTTGGCAAGTGATGGAATAGCCCTTCCAAACCCTAACAAACCTGCATTCTCGGTTGGAAGAAGGACCTCAGAGGAAACATCTACTTCAAGAAGTTCCAAAAATGTTTCCATTAATGATGTATCAATCTCTAGTATTCTAGCAAGGTAA 915 0.3792 MLGILPDGRQVAVKRLSRASNQGSEEFKNEVTFIAKLQHCNLVRLLACCLEENEKILVYEYLSNASLDFHLFDDEKRKQLDWKLRLSIINGIARGLLYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFENGQNQANTNRVAGTYGYMAPEYTMEGLFSMKFDVFSFGVLVLEIICGRKNSGFFLSEHGQSLLLYTWRMWCAGKCLELMDPVLENSYIANEVVKCIQIGLLCVQEVAANRPTISTVVVFLASDGIALPNPNKPAFSVGRRTSEETSTSRSSKNVSINDVSISSILAR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02788 304 Pfam Protein tyrosine and serine/threonine kinase 9 254 IPR001245 GO:0004672|GO:0006468
Pumo10g02788 304 SUPERFAMILY Protein kinase-like (PK-like) 4 288 IPR011009 -
Pumo10g02788 304 PIRSF ILK 7 262 - -
Pumo10g02788 304 ProSiteProfiles Protein kinase domain profile. 1 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02788 304 FunFam Uncharacterized protein 1 61 - -
Pumo10g02788 304 Gene3D Transferase(Phosphotransferase) domain 1 62 262 - -
Pumo10g02788 304 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 300 - -
Pumo10g02788 304 FunFam Liguleless narrow1 62 265 - -
Pumo10g02788 304 SMART serkin_6 1 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g02788 304 Gene3D Phosphorylase Kinase; domain 1 1 61 - -
Pumo10g02788 304 Pfam Domain of unknown function (DUF3403) 262 304 IPR021820 GO:0004674
Pumo10g02788 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02788 Pumo-Chr10 54028178 54030636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02788 3 304 Receptor kinase-like Gene Family AT4G11530 55.987 1.33e-116 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo10g02788 PK_Tyr_Ser-Thr 7.5e-42 CL0016