Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02631 ATGGACTCAGAAGGGGAAGTTGGGGCAAAGCCAGTGACAGCATTGGGTGCCCAAGTGTGCCAGATTTGTGGTGATGGTGTTGGGAAGACTGTGGATGGTGAACCGTTCATCGCGTGCGATGTTTGTGCTTTCCCTGTCTGCAGGCCTTGCTATGAGTATGAAAGGAAAGATGGGAATCAGTCTTGCCCCCAGTGCAAAACCCGGTACAAGAGGCACAAAGGAAGTGCTGCAATTCTCGGAGACAGGGAAGAGGATGGTGCTGCTGCTGATGGTGCCAGCGACTTCAATTATGATTCAGAAAATCAAAATCAAAACCAAAAGCAGAAGATTTCAGAGCGCTTGTTGAGCTGGCAATTAACATACGCACGAGGAGAGGAGGTTGATGCTCCAAATTATGATAAGGATGTTTCTCACAACCACATTCCTCTGCTGACCAGTGGACAAGAGGTATCTGGAGAGTTGTCTGCAGCCTCACCTGAGAGGCTCTCAATGGCATCTCCTGCAGTTGGTGGCGGAAAGCGTGTCCATAATATTCCATATTCATCTGACATTAATCAATCTCCAAATATCAGGGCTGGGGATCCAGGATTGGGCAATGTTGCATGGAAAGAAAGAGTTGATGGCTGGAAGATGAAGCAAGAAAAGAATGTTGTTCCAATGAGCACAGGCCAGGCTGCTTCTGAAAGAGGAGCTGGAGATATTGATGCTAGTACTGATGTGCTTGTGGATGATTCCTTGTTGAATGATGAAGCTCGACAGCCTCTTTCCAGGAAGGTTTCTATTCCTTCATCTAGGATAAATCCATATCGTATGGTCATTATGCTGCGGCTGCTTATCCTTTGCATTTTCTTGCATTATCGGATAACAAATCCAGTGCCCAATGCATATCCATTGTGGTTGGTATCAGTTATATGTGAGATTTGGTTTGCCATGTCTTGGATATTGGATCAATTTCCCAAGTGGCTTCCTGTAAACCGTGAAACATATCTTGACAGGCTTGCACTGAGGTATGATCGGGAAGGAGAACCGTCACAACTAGCTGCTGTTGACATTTTTGTCAGTACTGTTGATCCATTAAAGGAGCCCCCGCTTGTGACTGCCAATACCGTACTATCTATTCTTGCAGTTGACTATCCAGTGGATAAGGTCTCCTGCTATGTGTCTGATGATGGTGCTGCTATGTTGACATTTGAAGCACTTGCTGAGACATCGGAATTTGCAAGGAAATGGGTTCCTTTTAGCAAGAAGTATAGCATTGAACCCCGTGCACCTGAGTGGTATTTTGCTCAAAAGATTGACTACTTGAAAGATAAGGTTCATCCATCATTTGTCAAGGATCGTAGAGCAATGAAGAGAGAATATGAGGAATTTAAAGTTCGTGTTAATGGACTTGTTGCAAAGGCACAGAAAGTTCCTGAAGAGGGATGGGTGATGCAAGATGGTACCCCGTGGCCTGGAAATAACACTAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGTCAAAGTGGAGGACTTGACACTGAGGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGGTTCCAACATCACAAGAAAGCTGGTGCCATGAATGCACTTGTTCGAGTATCTGCAGTCCTTACCAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTTGGTAAACATGTTTGCTATGTCCAGTTCCCACAGAGGTTTGATGGTATTGATAGGAATGATAGATATGCCAATCGTAATACAGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTGGGTACTGGATGTGTCTTCAATAGGACAGCTTTATATGGTTATGAACCTCCTCTTAAACCCAAGCATAAAAAGCCTGGGTTGTTATCATCACTCTGTGGTGGAAATCGGAAGAAGAGTTCAAAATCTACTAAGAAAGGATCAGACAAGAAAAAATCTAGCAAGAATGTTGACCCAACTGTGCCCATTTTCAATCTAGAGGATATAGAAGAAGGAGTAGAAGGTACTGGATTTGATGATGAGAAATCACTACTTATGTCACAAATGAGTCTTGAGAAAAGGTTTGGTCAGTCTGCTGTCTTTGTTGCCTCTACGCTTATGGAGAATGGTGGTGTTCCTCAGTCTGCTACTCCAGAAACTCTTCTTAAGGAAGCTATTCATGTTATCAGCTGTGGTTACGAGGATAAAACTGATTGGGGAAGTGAGATAGGATGGATTTATGGTTCTGTCACAGAAGATATTCTTACTGGATTTAAGATGCATGCCCGCGGTTGGCGGTCTATATACTGCATGCCTAAGCGCCCAGCGTTTAAAGGTTCTGCTCCCATCAATCTTTCGGATCGTCTAAACCAAGTGCTTCGATGGGCTTTAGGTTCCGTGGAAATTCTTTTTAGCCGACATTGTCCTATCTGGTATGGTTATGGTGGAAGGTTAAAGTGGCTTGAAAGGTTTGCATATGTGAACACCACAATCTATCCAGTCACTGCCATTCCCCTACTCATTTATTGTATCTTGCCTGCTGTCTGTCTGCTGACTAACAAGTTCATTATTCCACAGATCAGTAACCTTGCAAGCATATGGTTCATCTCTCTCTTTCTTTCCATCTTTGCTACTGGAATCCTGGAGATGAGGTGGAGCGGTGTTGGAATCGACGAGTGGTGGAGGAATGAACAGTTTTGGGTCATCGGTGGTGTCTCGGCGCATCTCTTTGCCGTCTTCCAAGGCTTGCTCAAAGTTCTTGCTGGAATTGACACCAACTTCACTGTCACCTCCAAGGCCTCAGATGAAGATGGAGACTTTGCAGAACTCTACATGTTCAAATGGACCACCCTTCTCATCCCTCCAACAACCCTTCTCATAATAAACTTGGTGGGGGTGGTTGCTGGCATCTCCTATGCCATCAACAGTGGCTACCAATCATGGGGACCCCTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATCATCCATCTATACCCTTTCCTCAAAGGTCTCATGGGGAGGCAGAACAGAACACCAACCATTGTGGTGGTGTGGTCCGTTCTGCTTGCATCCATTTTCTCTCTCTTGTGGGTTAGAATTGATCCATTCACCACAAGGGTCACAGGTCCTGATGTTGAGTTGCGAGGTGGTGGTGGGTGGTTGCGATGGTTGTTGCAGTGGTGGTGTTCAGCGGTGGTGCGGTGGTATTGGGTGGTTGGGTGGAGGTAG 3303 0.4499 MDSEGEVGAKPVTALGAQVCQICGDGVGKTVDGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSAAILGDREEDGAAADGASDFNYDSENQNQNQKQKISERLLSWQLTYARGEEVDAPNYDKDVSHNHIPLLTSGQEVSGELSAASPERLSMASPAVGGGKRVHNIPYSSDINQSPNIRAGDPGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIMLRLLILCIFLHYRITNPVPNAYPLWLVSVICEIWFAMSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRVNGLVAKAQKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSLCGGNRKKSSKSTKKGSDKKKSSKNVDPTVPIFNLEDIEEGVEGTGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPVTAIPLLIYCILPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTTRVTGPDVELRGGGGWLRWLLQWWCSAVVRWYWVVGWR 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02631 1100 FunFam Cellulose synthase 466 640 - -
Pumo10g02631 1100 SUPERFAMILY RING/U-box 6 88 - -
Pumo10g02631 1100 SUPERFAMILY Nucleotide-diphospho-sugar transferases 363 876 IPR029044 -
Pumo10g02631 1100 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 252 1044 - -
Pumo10g02631 1100 MobiDBLite consensus disorder prediction 647 683 - -
Pumo10g02631 1100 Pfam Cellulose synthase 349 1071 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pumo10g02631 1100 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Pumo10g02631 1100 Pfam Zinc-binding RING-finger 10 86 IPR027934 -
Pumo10g02631 1100 MobiDBLite consensus disorder prediction 80 109 - -
Pumo10g02631 1100 CDD mRING-HC-C4C4_CesA 18 68 - -
Pumo10g02631 1100 FunFam Cellulose synthase 3 94 - -
Pumo10g02631 1100 MobiDBLite consensus disorder prediction 95 109 - -
Pumo10g02631 1100 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 468 640 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02631 Pumo-Chr10 48764448 48773160 Dispersed/Transposed