Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02621 ATGTACATCAAGGAGATTTGCCTGGAAGGGTTCAAGTCCTACGCGACCCGCACCGTGGTTCCGGGCTTCGACCCTTTCTTCAACGCCATCACCGGCCTCAACGGCTCCGGCAAGTCGAACATCCTCGACTCCATCTGCTTCGTCCTCGGCATCACCAATTTGCAGCAGGTTAGGGCTTCCAACCTCCAGGAACTCGTCTACAAGCAGGGCCAGGCCGGCATCACCAAAGCCACCGTCTCCGTCGTCTTCGACAACTCCGACAGGTCCAGAAGCCCTCTCGGATACGAAGGACATTCAGAAATCACAGTAACAAGACAGATTGTGGTTGGGGGAAGGAACAAATATTTGATCAATGGGAAGCTTGCGCAGCCTAGTCAAGTTCAGAACCTTTTTCATTCAGTGCAGCTAAATGTTAATAATCCACATTTCCTTATAATGCAAGGGCGCATCACTAAGGTTTTAAATATGAAACCGCCAGAGATATTGTCTATGCTTGAGGAAGCTGCGGGGACAAGAATGTATGAGACAAAGAAAGAGGCTGCTCTAAAAACACTTGAGAAGAAGCAGAGTAAGGTTGATGAGATTAACAAGCTTCTTGACCAGGAGATACTGCCTGCTCTGGAGAAGTTAAGGAAAGAAAAGACACAGTACATGCAATGGGCTAATGGCAATGCTGAGTTAGATAGGTTGAGAAGATTTTGTATTGCTTATGAGTATGTTCAAGCGGAGAGGATTAAAGACAATGCTGCTTCTGAGGTGGAAGAAGTGAAAGCCAAGATAGCTGAGATTGATGACGTTGCTAAGACAAATCAGGTGGAAATAAAGGAAATGGAGACCAAAATAGCTCAGTTGACTGCTGAAAAGGAAGCAAGCATGGGTGGAGAAATGAAATCTCTGTCAGAGAAGGTAGATGCACTTTCCCAGAATCTTGTGAGGGAGACGTCTGTACTAAATAATAAAGAAGACACTTTGAGGAGTGAAGAAGCCAGCAAAGCAAATCTTGTTAAAAATATTGAAGAATTGAAGCATTCTGTAGAAGAGAAGGCCTCTGCTGTTAAAAAGGCTGAAGAGGGGGCGGCAGATCTGAAAAATAAAGTTGATGACCTCACAAAGAGTCTAGAGGAGCATGAAAAAGAATACCAGGGTGTTTTAGCTGGCAAGAGCAGTGGTAATGAGGAGAAATGCTTAGAGGATCAACTAAGGGATGCAAAGGTAGCAGTTGGGAGTGCTGAAACAGAATTGAAACAGCTGAAAGCCAAAATTAGCCATTGTGAAAAGGAACTGAAGGAGAAAACAAATCAATTAAGGTCAAAATGTGAAGAAGCTAATGTTGTCGCAAATGAGCTCAACACTAGACAAAAAGATGTGGAGAATGTTAGAATGGAGTTGGAGTCTCTTTCTTATAAAGAGGGTGAGATGGAAGATTTACAAAAGGAGCGTATGACTGAGATGGACTGCGTGCAAAAGTTGAAGGATGAAATACGCAATCTTTCAGCAAACCTGGCAAATGTTGAATTTACATACCGTGATCCTGTTAAGAATTTTGATAGGTCAAAGGTGAAAGGTGTTGTTGCAAAACTCATCAAAGTAAAGGATAGGTCCACAATGACTGCCTTAGAGGTTACAGCTGCTGGAAAGTTGTATAATGTTGTTGTTGACTCAGAAAATACTGGAAAGCAACTACTACAGAATGGTAATCTTAGAAGAAGAGTGACAATTATACCTTTGAACAAAATACAATCCCATACTGTTTCCTCCAGAGTTCAACAAGCTGCTGTTAAATTGGTGGGCAAGGGGAATGCAGAAGTAGCTCTTTCTTTGGTTGGTTATGAAGAAGAATTGCAGAGTGCAATGGAATATGTGTTTGGTTCAACCTTTGTCTGCAAAACCATTGATGCTGCAAAGGAGGTGGCATTTAATCGGGAGATTCACACCACAAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTTCTGACTGGTGGAAGCCGCAAGGGAGGTGGTGATCTTTTGGGGCAACTTCATGCTTTGGCTGAGGCTGAGTCAAAACTTTCAGTGCATCAAAGAAGGTTGTCAGAGATTGAGGCAAAGATCTCAAAGCTCCTTCCACTTCAGAAAAAATTTATAGATCTCAAAGCACAATTAGAACTGAAGTCGTACGACCTTTCATTGTTTCAGAGCAGAGCTGAGCAAAATGAACATCATAAGCTTGGAGAATTAGTGAAGAAGATTGAGCAAGAGCTTAATGAAGCAAAATCTACAGTCAAGGACAAGCAACTTTTATATGAGGACTGTGTTAAAACTGTTTCATCTCTTGAGAAATCAATCAAAGATCATGACAATAACAGAGAGAGTAGGCTAAAAGGCTTGGAGAAAAAGATAAAGTCAATCAAATCTCAAATGCAGTCATCATTAAAAGATCTGAAGGGACATGATAGTGAAAAGGAGAGACTTGTAATGGAAATGGAAGCTGTTATCCAGGAGCAAGCATCCTTGGAGAATCAGTTAGCATCATTGGGAACACTGATTAGTAACCTTGCCTCTGAAGTAGAAGAACAAAGATCCACTGTTGCTGCAGCACGGAATAATCTTGATCAAATTCAGTCACAGCTGAAATCAGTTCGCCTAAAAATGAAGGAATGTGATAAGGAAATTAGTGCTATTATTAAAGAGCAGCAAAAGCTTGAACATAAAATTAGTGACAGTAATCTTGAAAGGAAGAGGATGGAAAATGAGGTAAAACGAATGGAGATGGAACAGAAAGACTGCTCTGTGAGAGTAGATAAATTAATAGAGAAGCACGCATGGATTGCTTCTGAAAAACAGTTGTTTGGTAGAAGTGGAACTGATTATGATTTTTCTTCCCGTGATCCTAGTAAAGCAAGGGAAGAACTTGAGGAGCTTCAGGCTGAACAATCTGGGCTTGAGAAAAGGGTGAACAAGAAAGTGATGGCAATGTTTGAGAAGGCAGAAGACGAGTACAATGATTTGATGTCCAAGAAAAACATAATTGAGAATGACAAGTCTAAAATCAAGAAGGTGATTGAAGAGCTAGATGAGAAGAAGAAGGAGACACTAAATGTTACCTGGATTAAAGTGAATAATGACTTTGGATCCATCTTTTCTACGCTACTACCGGGAACAATGGCCAAGTTAGAACCTCCAGAAGGATGCAGCTTCCTTGATGGTCTTGAGGTTCGTGTTGCATTTGGAAGTGTGTGGAAGCAGTCATTGTCTGAATTAAGTGGAGGACAGCGATCACTGCTTGCACTTTCTCTGATTCTGGCACTGCTTTTGTTCAAACCTGCTCCACTTTACATCCTTGATGAGGTTGATGCAGCTCTTGATTTGAGCCACACACAAAACATAGGGAGAATGATAAAGGCTCACTTTCCACACTCTCAGTTTATTGTGGTTTCCTTGAAGGAAGGCATGTTCAATAATGCAAATGTTCTTTTCCGGACAAAATTTGTGGATGGTGTTTCAACTGTTCAGCGAACTGTTGCAGCTAAACAAAGCAAATGA 3531 0.4152 MYIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSVVFDNSDRSRSPLGYEGHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVDEINKLLDQEILPALEKLRKEKTQYMQWANGNAELDRLRRFCIAYEYVQAERIKDNAASEVEEVKAKIAEIDDVAKTNQVEIKEMETKIAQLTAEKEASMGGEMKSLSEKVDALSQNLVRETSVLNNKEDTLRSEEASKANLVKNIEELKHSVEEKASAVKKAEEGAADLKNKVDDLTKSLEEHEKEYQGVLAGKSSGNEEKCLEDQLRDAKVAVGSAETELKQLKAKISHCEKELKEKTNQLRSKCEEANVVANELNTRQKDVENVRMELESLSYKEGEMEDLQKERMTEMDCVQKLKDEIRNLSANLANVEFTYRDPVKNFDRSKVKGVVAKLIKVKDRSTMTALEVTAAGKLYNVVVDSENTGKQLLQNGNLRRRVTIIPLNKIQSHTVSSRVQQAAVKLVGKGNAEVALSLVGYEEELQSAMEYVFGSTFVCKTIDAAKEVAFNREIHTTSVTLEGDIFQPSGLLTGGSRKGGGDLLGQLHALAEAESKLSVHQRRLSEIEAKISKLLPLQKKFIDLKAQLELKSYDLSLFQSRAEQNEHHKLGELVKKIEQELNEAKSTVKDKQLLYEDCVKTVSSLEKSIKDHDNNRESRLKGLEKKIKSIKSQMQSSLKDLKGHDSEKERLVMEMEAVIQEQASLENQLASLGTLISNLASEVEEQRSTVAAARNNLDQIQSQLKSVRLKMKECDKEISAIIKEQQKLEHKISDSNLERKRMENEVKRMEMEQKDCSVRVDKLIEKHAWIASEKQLFGRSGTDYDFSSRDPSKAREELEELQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQSK 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02621 1176 Coils Coil 736 763 - -
Pumo10g02621 1176 Coils Coil 817 837 - -
Pumo10g02621 1176 Coils Coil 178 198 - -
Pumo10g02621 1176 Pfam RecF/RecN/SMC N terminal domain 840 1161 IPR003395 -
Pumo10g02621 1176 FunFam Structural maintenance of chromosomes 2 995 1174 - -
Pumo10g02621 1176 Pfam SMC proteins Flexible Hinge Domain 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Pumo10g02621 1176 Coils Coil 967 1026 - -
Pumo10g02621 1176 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Pumo10g02621 1176 FunFam Structural maintenance of chromosomes 2 518 584 - -
Pumo10g02621 1176 FunFam Structural maintenance of chromosomes 2 1 202 - -
Pumo10g02621 1176 SUPERFAMILY Smc hinge domain 481 686 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Pumo10g02621 1176 Gene3D - 518 677 - -
Pumo10g02621 1176 PIRSF SMC 1 1156 IPR024704 GO:0005524|GO:0016887
Pumo10g02621 1176 Gene3D - 1 202 IPR027417 -
Pumo10g02621 1176 Gene3D - 577 667 - -
Pumo10g02621 1176 Coils Coil 239 287 - -
Pumo10g02621 1176 Coils Coil 789 809 - -
Pumo10g02621 1176 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Pumo10g02621 1176 Coils Coil 473 507 - -
Pumo10g02621 1176 Pfam RecF/RecN/SMC N terminal domain 2 383 IPR003395 -
Pumo10g02621 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1157 IPR027417 -
Pumo10g02621 1176 Coils Coil 400 466 - -
Pumo10g02621 1176 Gene3D - 995 1175 IPR027417 -
Pumo10g02621 1176 Coils Coil 845 928 - -
Pumo10g02621 1176 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 1 1173 - -
Pumo10g02621 1176 Coils Coil 679 699 - -
Pumo10g02621 1176 Coils Coil 317 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02621 Pumo-Chr10 48571163 48581133 Dispersed