Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02556 ATGGCCGGAAACTGCTTGCAGCCGGTGAAGCTCACCGGCAGCGGCCGCCCGGTGCTCGAACCGAACGAAATTGAGTGCTTCTTCCTCTCCGGCGTTGACCTTCTCTGCGAAGACGACCCCAGCTTCCCTCATCTCAAATCCGGCCTCCTCATCCTCACCACGCACCGCCTCCTCTGGCTCCCGGACTCCGCCGCCTCCGCCGGCTGCTCCGCTGGCGCCATCCCCCTCGCCGCCGTCTCCCACATTTTCTCCCCCAAGATGTCCCTCCGGAAGGTGTTCGCCTCGCCGCGGGTCCGGTTCCAGGTGTCGCTGTCGCCGGAGGGCAGGGTCGCGGCTGTGGGGTCACGATCGGTGGTGGCGACGGCGGTGGTGAGGGGGAAGGGGGACTGCGACGCGTTTTTGGCTAAGTTTTTGGAGAATTTGCGCGGCAGGGCGTGGGTGGAGGCGGGGAGTGGGTCGGGTTCGGGGTCGAATGCGGCGGTGGCGGCAACGGCGACGTCATCGTCGTCATCGGGCGGGATTTATTCGAGCGACGGGACGGTGAGGATGGTGGGAGTGTCGGGGATATTGAGGAAGGAGCAGGAGATGTGGGAGAGTACTGATAGGAGCTTGCAGGAGGCTTTTCAGGATTTGAATGCTCTCATGAGCAAGGCTAAAGAGATGGTGTTGCTAGCAGAGAAAATGAGGCTAAAACTTTTGTCTGGCTCAAATTCTCAAACCAATGCAACTAATGATGAGGAGATGGGTTCAAAGGAAGAGATGCAGGATTGGTTATTGAGTGTTGGTATTATATCCCCTGTTACCAAAGAGTCTGCGGGTGCTTTGTATCATCAACAACTTTCTCGTCAGTTGGCAGATTTTGTTAAAGTTCCACTTGAGAAAGCTGGGGGAATTATCAATCTTATTGATATATATTGTCTCTTCAATCGTGCTCGTGGCACAGAATTGATCTCACCTGATGATTTGTTGCAAGCATGTTCACTGTGGGAGAAGTTTGATGTCCCAGTGGTTCTGCGAAAGTTTGATAGTGGAGTCATGGTAATACAGACTAAGTCCCACAGTGATGAGGAGGTTTTCAATAAAATCAAGATGCTTGTTATGAAACCTGATGCCCTTCGAGCTGGGGTAAGTGCTAGTGATGCTGCAAGGACACTAGGGGTTGCCCCAGCAATGGCAAAGGAGCATCTCTTGTCTGCTGAGAGCAAAGGTTTACTATGCAGAGATATAAGCCCTGATGGATTTCGCTTTTATATTAACTTGTTCCCGGAAATTGATCAAGATGATATGTATTTAGTGAGAGATCAGGGAATTTATGCCTCGTGGGTACGGGCTAACCATACTCATGCTTAA 1350 0.5274 MAGNCLQPVKLTGSGRPVLEPNEIECFFLSGVDLLCEDDPSFPHLKSGLLILTTHRLLWLPDSAASAGCSAGAIPLAAVSHIFSPKMSLRKVFASPRVRFQVSLSPEGRVAAVGSRSVVATAVVRGKGDCDAFLAKFLENLRGRAWVEAGSGSGSGSNAAVAATATSSSSSGGIYSSDGTVRMVGVSGILRKEQEMWESTDRSLQEAFQDLNALMSKAKEMVLLAEKMRLKLLSGSNSQTNATNDEEMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVKVPLEKAGGIINLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVPVVLRKFDSGVMVIQTKSHSDEEVFNKIKMLVMKPDALRAGVSASDAARTLGVAPAMAKEHLLSAESKGLLCRDISPDGFRFYINLFPEIDQDDMYLVRDQGIYASWVRANHTHA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02556 449 FunFam vacuolar protein sorting-associated protein 36-like 352 423 - -
Pumo10g02556 449 ProSiteProfiles GLUE domain profile. 9 153 IPR021648 GO:0032266|GO:0043130
Pumo10g02556 449 Gene3D - 199 272 - -
Pumo10g02556 449 Gene3D - 352 423 IPR036388 -
Pumo10g02556 449 Gene3D - 9 151 IPR011993 -
Pumo10g02556 449 SUPERFAMILY PH domain-like 5 133 - -
Pumo10g02556 449 Gene3D - 273 350 IPR036388 -
Pumo10g02556 449 Pfam Vacuolar protein sorting protein 36 Vps36 11 102 IPR021648 GO:0032266|GO:0043130
Pumo10g02556 449 FunFam Vacuolar protein sorting protein (Vps36) 273 350 - -
Pumo10g02556 449 FunFam Vacuolar protein sorting-associated protein 36 4 144 - -
Pumo10g02556 449 SUPERFAMILY "Winged helix" DNA-binding domain 312 424 IPR036390 -
Pumo10g02556 449 Pfam EAP30/Vps36 family 184 408 IPR040608 -
Pumo10g02556 449 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 7 421 IPR037855 GO:0000814|GO:0032509|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02556 Pumo-Chr10 44456291 44471347 Wgd