Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02553 ATGGCTTTTCTTCTATCCAACCTCAAACCCTCTCTGCTACCCCAAACGCCTTCTTCATCAGTTGCAAAAGCCACTTCTCAAACCCCTTCTTCATTGTTCTTCACCTCTTATGCTCCACTTTCCACCCTCCAAAGTTCCACTGCACAGGTTGCTCAGGGGAATACACCAACCACTGGTGCCAAAGACGAGCACCAGCAGCAAAAGGATGAGTTTTATCTCAATCTTGGCCTTGCTGTGAGGACCCTCCGTGAGGACATGCCCTTGATCTTCGTCAAAGACCTCAATTATGACATTTACAGGGATGATATAACATTCAAAGACCCTTTGAATACATTTACTGGTATTGAGAAGTACAAATTGATCTTCTGGGCATTGAGGTTTCATGGTAAAATTTTGTTCCGCGAGATTGCTCTGGACGTCTATAGGATATGGCAGCCTTCAGAGAATGTGATATTGATCAGGTGGAACCTGAGGGGTGTGCCTAGGGTTCCATGGGAGGCGAAAGGAGAATTTCAGGGTACTTCGCGATACAAATTGGACCGAAATGGGAAGATTTATGAACACAAAGTTGATAATTTAGCATTCAATTTTCCACAGAGGCTCAAACCAGTTTCAGTTTTGGATTTGGTTACTGCCTGCCCTGCAAGTCCAAATCTAACATTTTCATGGGGTCCTTTGGATTCCAACTCTTCTTCATGGATAGAGTTTTATCAGGCTGTTAAGGACACATTGGATCAAGAAGAAATGTTGCTACCACAAGATTGTATGGCTACATGTTCATAG 783 0.4355 MAFLLSNLKPSLLPQTPSSSVAKATSQTPSSLFFTSYAPLSTLQSSTAQVAQGNTPTTGAKDEHQQQKDEFYLNLGLAVRTLREDMPLIFVKDLNYDIYRDDITFKDPLNTFTGIEKYKLIFWALRFHGKILFREIALDVYRIWQPSENVILIRWNLRGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQRLKPVSVLDLVTACPASPNLTFSWGPLDSNSSSWIEFYQAVKDTLDQEEMLLPQDCMATCS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02553 260 PANTHER RIKEN CDNA 2310061I04 GENE 38 225 IPR018790 -
Pumo10g02553 260 SUPERFAMILY NTF2-like 94 189 IPR032710 -
Pumo10g02553 260 Pfam Uncharacterized conserved protein (DUF2358) 78 188 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02553 Pumo-Chr10 44245903 44247173 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g02553 10 44245903 44247173 Pumo10g02553 10 44245903 44247173 ECH
Pumo4g02887 4 55286052 55288273 Pumo10g02553 10 44245903 44247173 PCT