Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo10g02552 | ATGGTTTCTCTCACGGGAAAATCTAGAGTGGGCTCAACTGTTGGCGGTGCCCAATCTCGCCCAAGTGTGGGTGGTAGGAATTTCAAGGTGTTTTCGGAAGTTGACCGGCCTAAAGTTGGTGATGGGAATATGACATCTGCAAGAGGAGCAGGTGCAAGTGCAACTGCAAGAAGGAGTACTCTGGTAGCTAACAAAGGGGTTATTCTTAATAGCACCAGTAATCCAAAGGGTGGTCTCAAAAAAAGTATGGATAAAAGTAGTGGCAAATATGGTACTTCTGTAGCAAATACAAATGTGAGAAAGGCATTGGCTGATGTTAGCAATGTTCAAGAAAACTTGACAACAGCTGTTGGGCATGCTAGCTCAAAAATGAAGGTTTCAGCAGGTTCAAGGACCAAAATAGTGGGCGTATCTTTGAGGAAATCCTTCACGGGAAGAGTGCAAAGAAGCACAAGGAAAGGTGATATTCAGTTAGATGCACTCAATAGAGATGATCAGAAGAATAATACAAATGAAGGCCAATCAGTTCTTGCCACAAAGGACAGGTTTACAAGGAATCCTATAGCTACAAGCACTTCAAGGAAGTCTTTACCAGTACCGAGGAGGGTAAGCAGGGAAGATACGAGTAACACAAAGGAAAATGTTAAAATTTCTCAAACAGCAAAGGGCCAAAGTGTTCTCCCTACTAAGGCAACCACAAACAGAAGAGATAGTTCCCAACTGATTAATGCAAGAAGCCATCTATGGAAGAATCGAGTGAGTGATGGTTTTGTTCAAATGGTTCAACCTAATGTTTTACTTGCATCCTCAAGGAAGTCCACCAAGCCTATTGTTAAGACCACACTCAAGGCTTTCACTGCTCAAAGGACTTTAAAATCTAAATCCAAGACCAAATTAGAATCAACTACAGCAACATCATCTCAGAACAAATCCATATCAGCTCAGAACAAATTAGAATCAACTACTTCATCATCTCAGGACAAGGAAACAGTTTCTTTGTCTCTTCCCAAGAAGGGTTCGACAGTTTCTGATGATGCAAATCAAAGTCATCTTCCATCTGGAGAGAACAATCAGAAAACAGATTTGTCAGAGTTTATTCCAAGGAAAAAATCCAGCCGCCGGAAATCATATACAACTTCATTAATTGAAGGATCTAAGTTTCTCAAGGAAAGTGGTGAAGTTAGAGAGCAGGATAACCTACCAAATATAGATAATGAATGCAATCAACTTGAAGTTTCTGAATACATTGATGACATATATCGGTACTATTGGGTTACTGAGGCACATAATCCAGTTCTAGCAAATTACATGTCAATTCAGACAGACATTTCTCCTCGTTTGCGGGGCATTTTGATCAACTGGCTGATTGAAGTACACTTCAAATTTGACTTGATGCCAGAAACACTGTATCTCACTGTTACGTTGATGGATCAATATCTTTCCCTAGTGACTATCAAAATGACCGATATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAGTATGAGGATTTTTGGCATCCTAGGGTCAAAGATTTAATTAGCATCTCAGCTGAGTCATATACTAGGGATCAAATGCTTGGAATGGAAAAACTTATTCTTAGAAAATTAAAGTTCCGTCTTAATGCTCCTACTCCTTATGTTTTTATGGTGAGGTTTCTCAAGGCTGCGCAATCAGATAAAAAGCTTGAGCACATGGCATTCTTTCTGGTTGACCTATGCTTAATTGAATATGAAGCTTTAGCATTCAAGCCTTCATTACTTTGTGCATCAGCTCTCTATGTTGCACGTTGTACTTTGCAAATAACTCCACCATGGACCCCATTACTTCAAAAACATGCACGTTATGAAGTATCACAGATCAGGGATTGTGCGGATATGATACTGAAGTTCCACAAAGCTGCTGGGGTTGGAAAGTTGAAGGTTACATATGAGAAATACTCTAGACAGGAACTCAGTAGGGTTGCAGCAGTGAAACCGTTGGATAGACTTCCCCTGTGA | 2007 | 0.4026 | MVSLTGKSRVGSTVGGAQSRPSVGGRNFKVFSEVDRPKVGDGNMTSARGAGASATARRSTLVANKGVILNSTSNPKGGLKKSMDKSSGKYGTSVANTNVRKALADVSNVQENLTTAVGHASSKMKVSAGSRTKIVGVSLRKSFTGRVQRSTRKGDIQLDALNRDDQKNNTNEGQSVLATKDRFTRNPIATSTSRKSLPVPRRVSREDTSNTKENVKISQTAKGQSVLPTKATTNRRDSSQLINARSHLWKNRVSDGFVQMVQPNVLLASSRKSTKPIVKTTLKAFTAQRTLKSKSKTKLESTTATSSQNKSISAQNKLESTTSSSQDKETVSLSLPKKGSTVSDDANQSHLPSGENNQKTDLSEFIPRKKSSRRKSYTTSLIEGSKFLKESGEVREQDNLPNIDNECNQLEVSEYIDDIYRYYWVTEAHNPVLANYMSIQTDISPRLRGILINWLIEVHFKFDLMPETLYLTVTLMDQYLSLVTIKMTDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKLILRKLKFRLNAPTPYVFMVRFLKAAQSDKKLEHMAFFLVDLCLIEYEALAFKPSLLCASALYVARCTLQITPPWTPLLQKHARYEVSQIRDCADMILKFHKAAGVGKLKVTYEKYSRQELSRVAAVKPLDRLPL | 668 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo10g02552 | 668 | SUPERFAMILY | Cyclin-like | 408 | 544 | IPR036915 | - | |
| Pumo10g02552 | 668 | MobiDBLite | consensus disorder prediction | 146 | 214 | - | - | |
| Pumo10g02552 | 668 | Pfam | Cyclin, C-terminal domain | 546 | 661 | IPR004367 | - | |
| Pumo10g02552 | 668 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Pumo10g02552 | 668 | FunFam | Cyclin N-terminal domain containing 2 | 433 | 541 | - | - | |
| Pumo10g02552 | 668 | PANTHER | CYCLINS | 350 | 650 | IPR039361 | - | |
| Pumo10g02552 | 668 | CDD | CYCLIN_AtCycB-like_rpt2 | 546 | 662 | - | - | |
| Pumo10g02552 | 668 | SMART | Cyclin_C_2 | 546 | 663 | IPR004367 | - | |
| Pumo10g02552 | 668 | MobiDBLite | consensus disorder prediction | 72 | 92 | - | - | |
| Pumo10g02552 | 668 | MobiDBLite | consensus disorder prediction | 152 | 166 | - | - | |
| Pumo10g02552 | 668 | FunFam | putative cyclin-B3-1 isoform X3 | 542 | 667 | - | - | |
| Pumo10g02552 | 668 | Gene3D | - | 433 | 538 | - | - | |
| Pumo10g02552 | 668 | Gene3D | - | 539 | 666 | - | - | |
| Pumo10g02552 | 668 | SMART | cyclin_7 | 550 | 632 | IPR013763 | - | |
| Pumo10g02552 | 668 | SMART | cyclin_7 | 453 | 537 | IPR013763 | - | |
| Pumo10g02552 | 668 | MobiDBLite | consensus disorder prediction | 291 | 361 | - | - | |
| Pumo10g02552 | 668 | Pfam | Cyclin, N-terminal domain | 418 | 544 | IPR006671 | - | |
| Pumo10g02552 | 668 | CDD | CYCLIN_CCNB1-like_rpt1 | 412 | 541 | - | - | |
| Pumo10g02552 | 668 | MobiDBLite | consensus disorder prediction | 291 | 371 | - | - | |
| Pumo10g02552 | 668 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Pumo10g02552 | 668 | SUPERFAMILY | Cyclin-like | 546 | 665 | IPR036915 | - | |
| Pumo10g02552 | 668 | MobiDBLite | consensus disorder prediction | 167 | 198 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo10g02552 | Pumo-Chr10 | 44231155 | 44242053 | Transposed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pumo10g02552 | 10 | 44231155 | 44242053 | Pumo10g02552 | 10 | 44231155 | 44242053 | ECH |