Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g02535 ATGGCTAAGGTTGAAAGTGTTCACGACTTCCTCAAAGTTTTTGTGGAGAAGATATTAAGAGTTCAACCAGACATAAAAAAGTTATACCTTTTGCTGAGAGCACCAAATCCTTATTTAGCTACCTGCCGCTTGCAAAATGAGGTCATTGGGAAGGACTTATTCAGGGTGCTGCGAGATAATTGGGGTGCAGATTTTGGTTCTTTTATATCGAAGAAAGTTGTAGTAGTTGCCGGTGATTTTTCTCTTGACAACTTGGGAATTAAAGACGAAAACATGAGGAGCCAGATGTTTGAAGAGTTAGATATTATAGTACACACAGCTGCAACTACCAATTTTAATGAGAGATACGATATTGCAATGAGCACTAACACAATGGGAGCTTTTCATGTTGTGAACTTCGCTAAAAATTGTCATAAACTAGATATTGTTCTCCATGTATCTACTGCCTATGTGTGTGGGGAGGCCGAAGGACTTATAGTTGAGGAGCCCTTACATGTCAATCAGATGCAAAAAAGATCTACAAAATTAGATATCAATTTAGAAAAGCAGTTGGTTGAAGAAAAATTGAAAGAGCTCAGAGCACATAACACTAATAAAGAATTAACCACATCAGTTATGAAAAGTTTTGGACTTGCAAGGGCAAATTTACATGGCTGGCCAAACACCTATGTGTTCACCAAAGCTATGGGAGAAATGCTTTTAATGAAAATGAAAGACACTCTACCATTGTTCATCATACGCCCCACTATGGTAATTAGCACACACTCTGAACCTTTTCCGGGTTGGATTGAAGATGTCAGAACTATAGACTTTGTGGTGGTTAATTATGGTCAAGGAATACTAACAAGCTTTGTTGGAAATCCTGAGACAATTTTTGATTTGATACCAGTGGACATGGTGGTAAATTTCATGATAGTAGCATTGATGGCTCTATTCAAAGGTTTATCCCAAAATTTGGTGTACCATATTGGTTCTTCATTGAGAAATCCTCTCAAATACATTGATCTTGTAGATTTTATGTATTATTACTTTACAAAAAATCCATGTGTTAATAAATATGGAAAGCCAATAGTTGTCACCAAGAAACTAACTATTACAGGAGTGAATAAGCTCAACCAAACTAAGGGGTCAAAGTTGGTGATGAAAACTGAAGATTTGTACAGATCTTATTCCCTCTTTAAGGGCATCTTTGATGTCAAGAATGCTGAAAGTTTAAGAATGTTAACAAAGGAAGTTGCTAATATGGATGACAAATTTGACTTTGATCCAAAGAGCATTAATTGGAAAGACTACATGATGAATGTTCATTTTCCTGGCCTAATGAAGTACTCTGTCCAGGCATTACCTATTAGAAGCAAGATGTAA 1365 0.3634 MAKVESVHDFLKVFVEKILRVQPDIKKLYLLLRAPNPYLATCRLQNEVIGKDLFRVLRDNWGADFGSFISKKVVVVAGDFSLDNLGIKDENMRSQMFEELDIIVHTAATTNFNERYDIAMSTNTMGAFHVVNFAKNCHKLDIVLHVSTAYVCGEAEGLIVEEPLHVNQMQKRSTKLDINLEKQLVEEKLKELRAHNTNKELTTSVMKSFGLARANLHGWPNTYVFTKAMGEMLLMKMKDTLPLFIIRPTMVISTHSEPFPGWIEDVRTIDFVVVNYGQGILTSFVGNPETIFDLIPVDMVVNFMIVALMALFKGLSQNLVYHIGSSLRNPLKYIDLVDFMYYYFTKNPCVNKYGKPIVVTKKLTITGVNKLNQTKGSKLVMKTEDLYRSYSLFKGIFDVKNAESLRMLTKEVANMDDKFDFDPKSINWKDYMMNVHFPGLMKYSVQALPIRSKM 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g02535 454 PANTHER MALE STERILITY PROTEIN 2-RELATED 12 445 IPR026055 GO:0080019
Pumo10g02535 454 CDD FAR_C 375 443 IPR033640 -
Pumo10g02535 454 Coils Coil 182 202 - -
Pumo10g02535 454 Pfam Male sterility protein 12 304 IPR013120 -
Pumo10g02535 454 Gene3D - 12 374 - -
Pumo10g02535 454 CDD FAR-N_SDR_e 10 348 - -
Pumo10g02535 454 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 68 373 IPR036291 -
Pumo10g02535 454 Pfam Male sterility protein 374 445 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g02535 Pumo-Chr10 43550188 43565504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g02535 12 361 Acyl Lipid Metabolism Gene Families AT5G22500 52.137 3.30e-131 383